Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0880
         (675 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9BQS2 Cluster: Synaptotagmin-15; n=31; Tetrapoda|Rep: ...    35   1.6  
UniRef50_UPI0000DB756E Cluster: PREDICTED: similar to CG4670-PA;...    34   2.7  
UniRef50_Q2GGL4 Cluster: Putative uncharacterized protein; n=1; ...    34   2.7  
UniRef50_Q8I5T0 Cluster: Putative uncharacterized protein; n=1; ...    34   3.6  
UniRef50_Q22TU8 Cluster: Putative uncharacterized protein; n=4; ...    34   3.6  
UniRef50_Q9PQ08 Cluster: Unique hypothetical; n=2; cellular orga...    33   4.8  
UniRef50_Q4YBU3 Cluster: Putative uncharacterized protein; n=4; ...    33   8.4  
UniRef50_A7TTH4 Cluster: Putative uncharacterized protein; n=1; ...    33   8.4  

>UniRef50_Q9BQS2 Cluster: Synaptotagmin-15; n=31; Tetrapoda|Rep:
           Synaptotagmin-15 - Homo sapiens (Human)
          Length = 421

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
 Frame = +3

Query: 120 SPVVKL-LQESNQTFFQSFLKPNLIHLFPIKTNPIY*DIHYWFQIS*NSINT-ITFFSPY 293
           SP+VKL L    + F QS  K          +NP + D H+ FQ+S  +I   +  FS Y
Sbjct: 182 SPLVKLYLLPDERRFLQSKTKRKT-------SNPQF-DEHFIFQVSSKTITQRVLKFSVY 233

Query: 294 HKINKNQHKLSGQTLF 341
           H   + +H+L GQ LF
Sbjct: 234 HVDRQRKHQLLGQVLF 249


>UniRef50_UPI0000DB756E Cluster: PREDICTED: similar to CG4670-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to CG4670-PA
           - Apis mellifera
          Length = 592

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +2

Query: 224 LGYSLLVSNKLK*YKHDYFFQSLPQDQQKSTQTFWPNIILHNYETTTTIW 373
           LG  +   NKL   +H      L ++QQ+     WPNI  + Y  TT IW
Sbjct: 138 LGLVMEKYNKLNELRHS-LIDLLEREQQEGRGISWPNIAPYRYYETTNIW 186


>UniRef50_Q2GGL4 Cluster: Putative uncharacterized protein; n=1;
           Ehrlichia chaffeensis str. Arkansas|Rep: Putative
           uncharacterized protein - Ehrlichia chaffeensis (strain
           Arkansas)
          Length = 301

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +1

Query: 358 DNDDMVILLILYNKNHIVDFKHLKYIIQN 444
           DNDD  ++  + +KNH+ D  +L+Y +QN
Sbjct: 43  DNDDAELICNMIDKNHVQDLLYLRYYVQN 71


>UniRef50_Q8I5T0 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 735

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
 Frame = -3

Query: 178 FKND*KNVWLDSCNS-LTTGEPY---KIEINLHKLLNIFFFQNIE--SNMYLTNL 32
           FKND  NV+ +SCNS L   + Y   +   N+  LL+I+F QNI+  +N YL  L
Sbjct: 237 FKND-HNVYNNSCNSTLEESKEYVCNEYVKNIFNLLSIYFLQNIDLINNHYLCRL 290


>UniRef50_Q22TU8 Cluster: Putative uncharacterized protein; n=4;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1388

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 22/65 (33%), Positives = 34/65 (52%)
 Frame = +3

Query: 147 SNQTFFQSFLKPNLIHLFPIKTNPIY*DIHYWFQIS*NSINTITFFSPYHKINKNQHKLS 326
           +N+ F++ F   +   L  IK + +   IHY  Q+S N  NTI F +    I  NQ  L 
Sbjct: 486 ANKLFYKQFKTIDTSQLKTIKIDSLIPIIHYLIQLSKNQKNTIKFQTVL--IQPNQDFLL 543

Query: 327 GQTLF 341
           G+++F
Sbjct: 544 GKSIF 548


>UniRef50_Q9PQ08 Cluster: Unique hypothetical; n=2; cellular
            organisms|Rep: Unique hypothetical - Ureaplasma parvum
            (Ureaplasma urealyticum biotype 1)
          Length = 4688

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -3

Query: 187  KFGFKND*KNVWLDSCNSLTTGEPYKIEINLHKLLNIFFFQNIESNMYLTN 35
            K    N   NV LD+ NS+ +   +  ++  HKL+NI    N+ +N    N
Sbjct: 4059 KNNINNSENNVILDNTNSINSNYEFTTKVGDHKLINITSSNNVNTNSQTIN 4109


>UniRef50_Q4YBU3 Cluster: Putative uncharacterized protein; n=4;
            Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein - Plasmodium berghei
          Length = 1247

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 12/30 (40%), Positives = 22/30 (73%)
 Frame = -1

Query: 624  IYNYFKMYCDFFYILNYFISEMFYFNILLF 535
            +YN FK YC + Y++++ +S+++Y NI  F
Sbjct: 1094 VYNNFKQYCLYLYVVDH-VSKIYYKNIRSF 1122


>UniRef50_A7TTH4 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 665

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
 Frame = +2

Query: 182 KFNTLISHKNQSHILGYSLLVSNKLK*YKHDYF---FQSLPQDQQKSTQ--TFWPNIILH 346
           KFN  I + N S ILG+ + VSN +K +K       F  L +  Q S +   FW   +  
Sbjct: 486 KFNDDILNDNSSDILGFEVKVSNLMKGHKRTIAPLKFPELDEQPQLSAEIMNFWQEQLKI 545

Query: 347 NYETTTTIW 373
           +Y   ++ W
Sbjct: 546 DYYKDSSKW 554


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,839,674
Number of Sequences: 1657284
Number of extensions: 11402144
Number of successful extensions: 25963
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 24362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25924
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)