Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0880
(675 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 23 2.3
AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory recept... 23 2.3
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 23 3.0
AM292349-1|CAL23161.1| 248|Tribolium castaneum gustatory recept... 23 3.0
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 4.0
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 4.0
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 4.0
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 21 7.0
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 21 9.2
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 9.2
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 21 9.2
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 23.0 bits (47), Expect = 2.3
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -1
Query: 300 SCGKD*KK*SCLYYFSLFETSNEYPNIWD 214
+C K +K Y S+ EYP IW+
Sbjct: 71 NCAKCTEKQRTAAYRSIKRLKKEYPKIWE 99
>AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory receptor
candidate 33 protein.
Length = 321
Score = 23.0 bits (47), Expect = 2.3
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 18 FYISNKLVRYIFDSIFWKKKMFRSLCRFISILYGSPVVKLL 140
++ISN V I FWKKK + + +L G + K L
Sbjct: 61 YFISN--VYQILAYNFWKKKYWSEFLANLKLLKGRKIRKNL 99
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 22.6 bits (46), Expect = 3.0
Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -3
Query: 142 CNSLTTGEPYKIEINLHKLLN-IFFFQNIESNMYLTNL 32
C SL+ + +KI I L++L+ +FFF + +++ + +
Sbjct: 75 CASLSFYKAFKIGILLNQLITPLFFFHSFMTSVLFSQV 112
>AM292349-1|CAL23161.1| 248|Tribolium castaneum gustatory receptor
candidate 28 protein.
Length = 248
Score = 22.6 bits (46), Expect = 3.0
Identities = 10/50 (20%), Positives = 24/50 (48%)
Frame = +3
Query: 231 IHYWFQIS*NSINTITFFSPYHKINKNQHKLSGQTLFCIIMKRQRRYGNS 380
+H+++ ++ S + FF I ++H ++ + + R YG+S
Sbjct: 110 VHFYYPVATMSFYVLNFFGSIQFIIISKHWVTIMKEWSFMEMSMRNYGSS 159
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1
Query: 624 IYNYFKMYCDFFYILNYFISEMF 556
++ Y+ + FY+LN+F S F
Sbjct: 110 VHFYYPVATMSFYVLNFFGSIQF 132
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.2 bits (45), Expect = 4.0
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 4 FYTTYFIFLIN**GTYLIQYFGRKKC 81
+ T +++LIN TY+ FG+ C
Sbjct: 128 YMTGIWVWLINISATYICYAFGKFSC 153
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.2 bits (45), Expect = 4.0
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 4 FYTTYFIFLIN**GTYLIQYFGRKKC 81
+ T +++LIN TY+ FG+ C
Sbjct: 361 YMTGIWVWLINISATYICYAFGKFSC 386
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.2 bits (45), Expect = 4.0
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 4 FYTTYFIFLIN**GTYLIQYFGRKKC 81
+ T +++LIN TY+ FG+ C
Sbjct: 361 YMTGIWVWLINISATYICYAFGKFSC 386
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 21.4 bits (43), Expect = 7.0
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -3
Query: 97 LHKLLNIFFFQNIESNMYL 41
LH+L N +F ++E+N+ +
Sbjct: 324 LHELRNNYFHMDLENNVII 342
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -3
Query: 151 LDSCNSLTTGEPYK--IEINLHKLLN 80
+DSC+++ TGE + + N ++ LN
Sbjct: 381 VDSCSNIQTGEQFARLLRHNFNRHLN 406
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -3
Query: 151 LDSCNSLTTGEPYK--IEINLHKLLN 80
+DSC+++ TGE + + N ++ LN
Sbjct: 388 VDSCSNIQTGEQFARLLRHNFNRHLN 413
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -3
Query: 97 LHKLLNIFFFQNIESNM 47
LH+L N +F ++E+N+
Sbjct: 324 LHELRNNYFHMDLENNV 340
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,960
Number of Sequences: 336
Number of extensions: 3663
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -