Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0879
(646 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC025249-1|AAH25249.1| 574|Homo sapiens zinc finger and BTB dom... 31 2.7
AK027045-1|BAB15636.1| 574|Homo sapiens protein ( Homo sapiens ... 31 2.7
M83566-1|AAA35629.1| 2181|Homo sapiens calcium channel alpha-1 s... 31 3.5
M76558-1|AAA58402.1| 2161|Homo sapiens calcium channel alpha-1D ... 31 3.5
D43747-1|BAA07804.1| 2170|Homo sapiens voltage-dependent calcium... 31 3.5
AB209171-1|BAD92408.1| 1854|Homo sapiens calcium channel, voltag... 31 3.5
BC130541-1|AAI30542.1| 664|Homo sapiens zinc finger protein 710... 31 4.6
BC126476-1|AAI26477.1| 664|Homo sapiens zinc finger protein 710... 31 4.6
AL133380-4|CAI23046.1| 1036|Homo sapiens mixed lineage kinase 4 ... 31 4.6
AL133380-3|CAI23045.1| 570|Homo sapiens mixed lineage kinase 4 ... 31 4.6
AK094712-1|BAC04404.1| 664|Homo sapiens protein ( Homo sapiens ... 31 4.6
AJ311798-1|CAC84640.1| 1036|Homo sapiens mixed lineage kinase 4b... 31 4.6
AJ311797-1|CAC84639.1| 570|Homo sapiens mixed lineage kinase 4a... 31 4.6
>BC025249-1|AAH25249.1| 574|Homo sapiens zinc finger and BTB domain
containing 3 protein.
Length = 574
Score = 31.5 bits (68), Expect = 2.7
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +2
Query: 227 GVANEQPGTQLRRPKAVSDEPKVDTSKSKLSADAKEWYPANYTSQALPAYNTEPAP 394
G QPG ++ P + P V + + E P NY S + A + EP P
Sbjct: 242 GADTTQPGMEVDAPHLRAPHPPVADVSLASPSSSTETIPTNYFSSGISAVSLEPLP 297
>AK027045-1|BAB15636.1| 574|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23392 fis, clone HEP17418. ).
Length = 574
Score = 31.5 bits (68), Expect = 2.7
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +2
Query: 227 GVANEQPGTQLRRPKAVSDEPKVDTSKSKLSADAKEWYPANYTSQALPAYNTEPAP 394
G QPG ++ P + P V + + E P NY S + A + EP P
Sbjct: 242 GADTTQPGMEVDAPHLRAPHPPVADVSLASPSSSTETIPTNYFSSGISAVSLEPLP 297
>M83566-1|AAA35629.1| 2181|Homo sapiens calcium channel alpha-1
subunit protein.
Length = 2181
Score = 31.1 bits (67), Expect = 3.5
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 114 IYQSRLWNCIKAAL*NC--CRGLIVKMNNGDISAPKGRGRGWQ 236
+++ + + C A N CRGL + +GD+ +P R R WQ
Sbjct: 1056 LFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQ 1098
>M76558-1|AAA58402.1| 2161|Homo sapiens calcium channel alpha-1D
subunit protein.
Length = 2161
Score = 31.1 bits (67), Expect = 3.5
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 114 IYQSRLWNCIKAAL*NC--CRGLIVKMNNGDISAPKGRGRGWQ 236
+++ + + C A N CRGL + +GD+ +P R R WQ
Sbjct: 1036 LFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQ 1078
>D43747-1|BAA07804.1| 2170|Homo sapiens voltage-dependent calcium
channel alpha1 subunit, CACN4 protein.
Length = 2170
Score = 31.1 bits (67), Expect = 3.5
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 114 IYQSRLWNCIKAAL*NC--CRGLIVKMNNGDISAPKGRGRGWQ 236
+++ + + C A N CRGL + +GD+ +P R R WQ
Sbjct: 1047 LFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQ 1089
>AB209171-1|BAD92408.1| 1854|Homo sapiens calcium channel,
voltage-dependent, L type, alpha 1D subunit variant
protein.
Length = 1854
Score = 31.1 bits (67), Expect = 3.5
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 114 IYQSRLWNCIKAAL*NC--CRGLIVKMNNGDISAPKGRGRGWQ 236
+++ + + C A N CRGL + +GD+ +P R R WQ
Sbjct: 729 LFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQ 771
>BC130541-1|AAI30542.1| 664|Homo sapiens zinc finger protein 710
protein.
Length = 664
Score = 30.7 bits (66), Expect = 4.6
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -3
Query: 515 FSLDPCFQLLQVNKTCHPNCMDFDLELDEVYLVQRGEMVYMGQVQCCKRVALEKCNL 345
F D ++ +K + +D ++++D+ YLV+ G+ Q + C++ K NL
Sbjct: 254 FEADTAGSTVERHKKAQLDRLDINVQIDDSYLVEAGDRQKRWQCRMCEKSYTSKYNL 310
>BC126476-1|AAI26477.1| 664|Homo sapiens zinc finger protein 710
protein.
Length = 664
Score = 30.7 bits (66), Expect = 4.6
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -3
Query: 515 FSLDPCFQLLQVNKTCHPNCMDFDLELDEVYLVQRGEMVYMGQVQCCKRVALEKCNL 345
F D ++ +K + +D ++++D+ YLV+ G+ Q + C++ K NL
Sbjct: 254 FEADTAGSTVERHKKAQLDRLDINVQIDDSYLVEAGDRQKRWQCRMCEKSYTSKYNL 310
>AL133380-4|CAI23046.1| 1036|Homo sapiens mixed lineage kinase 4
(KIAA1804) protein.
Length = 1036
Score = 30.7 bits (66), Expect = 4.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 338 YPANYTSQALPAYNTEPAPYRPSRP 412
+PANY + PA + P P RPS P
Sbjct: 92 FPANYVAPCRPAASPAPPPSRPSSP 116
>AL133380-3|CAI23045.1| 570|Homo sapiens mixed lineage kinase 4
(KIAA1804) protein.
Length = 570
Score = 30.7 bits (66), Expect = 4.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 338 YPANYTSQALPAYNTEPAPYRPSRP 412
+PANY + PA + P P RPS P
Sbjct: 92 FPANYVAPCRPAASPAPPPSRPSSP 116
>AK094712-1|BAC04404.1| 664|Homo sapiens protein ( Homo sapiens
cDNA FLJ37393 fis, clone BRAMY2027073, moderately
similar to Fugu rubripes zinc finger protein. ).
Length = 664
Score = 30.7 bits (66), Expect = 4.6
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -3
Query: 515 FSLDPCFQLLQVNKTCHPNCMDFDLELDEVYLVQRGEMVYMGQVQCCKRVALEKCNL 345
F D ++ +K + +D ++++D+ YLV+ G+ Q + C++ K NL
Sbjct: 254 FEADTAGSTVERHKKAQLDRLDINVQIDDSYLVEAGDRQKRWQCRMCEKSYTSKYNL 310
>AJ311798-1|CAC84640.1| 1036|Homo sapiens mixed lineage kinase 4beta
protein.
Length = 1036
Score = 30.7 bits (66), Expect = 4.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 338 YPANYTSQALPAYNTEPAPYRPSRP 412
+PANY + PA + P P RPS P
Sbjct: 92 FPANYVAPCRPAASPAPPPSRPSSP 116
>AJ311797-1|CAC84639.1| 570|Homo sapiens mixed lineage kinase
4alpha protein.
Length = 570
Score = 30.7 bits (66), Expect = 4.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 338 YPANYTSQALPAYNTEPAPYRPSRP 412
+PANY + PA + P P RPS P
Sbjct: 92 FPANYVAPCRPAASPAPPPSRPSSP 116
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,794,038
Number of Sequences: 237096
Number of extensions: 2229949
Number of successful extensions: 5310
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5306
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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