BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0879 (646 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 26 0.27 AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 22 5.8 AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 22 5.8 DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 7.7 AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 7.7 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 7.7 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 26.2 bits (55), Expect = 0.27 Identities = 12/45 (26%), Positives = 22/45 (48%) Frame = +2 Query: 356 SQALPAYNTEPAPYRPSRPSVQGRLRQAQDQNPYNLDDMSYSLEE 490 +QA P + +P + Q + +Q Q + P DD + ++EE Sbjct: 826 AQAQPQQQQQQQQQQPQQQQQQQQQQQQQQRGPMTNDDFNPNIEE 870 >AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. Length = 366 Score = 21.8 bits (44), Expect = 5.8 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = -3 Query: 575 VSNLPGSKVISHITVIKFAMFSLDPCFQLLQVN 477 + LP K +S I +K A +D FQ+L N Sbjct: 280 IPTLPSDK-LSKIQTLKLATRYIDFLFQVLHCN 311 >AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase protein. Length = 580 Score = 21.8 bits (44), Expect = 5.8 Identities = 6/16 (37%), Positives = 12/16 (75%) Frame = +3 Query: 279 QTNQRWILLNRSYQQM 326 QTN+ W+ +N +Y+ + Sbjct: 438 QTNKTWLPVNENYKSL 453 >DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex determiner protein. Length = 178 Score = 21.4 bits (43), Expect = 7.7 Identities = 4/17 (23%), Positives = 14/17 (82%) Frame = -2 Query: 141 YNSINDFDRYIYFRRHV 91 YN+ N++++ +Y++ ++ Sbjct: 94 YNNYNNYNKKLYYKNYI 110 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 21.4 bits (43), Expect = 7.7 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +3 Query: 300 LLNRSYQQMLKNGTLQITLLK 362 L R+Y ++L NGTL + +K Sbjct: 757 LRERAYTKILSNGTLLLQHVK 777 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 21.4 bits (43), Expect = 7.7 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +3 Query: 300 LLNRSYQQMLKNGTLQITLLK 362 L R+Y ++L NGTL + +K Sbjct: 753 LRERAYTKILSNGTLLLQHVK 773 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 189,018 Number of Sequences: 438 Number of extensions: 4254 Number of successful extensions: 10 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 19438227 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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