BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0878 (277 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_03_0786 + 21510477-21511451,21512272-21512499 32 0.057 03_06_0295 - 32897545-32897805,32897859-32898714,32898843-32899096 31 0.13 08_01_1072 + 10954080-10954851,10954956-10955027,10955108-109551... 29 0.70 10_02_0004 - 4055613-4055903 27 2.8 09_06_0048 + 20477076-20478547,20478643-20478722,20478880-204788... 27 2.8 08_02_1580 + 28002552-28002653,28002900-28002979,28003074-28003326 27 2.8 06_02_0173 - 12601025-12601071,12601632-12601698,12601857-126019... 27 2.8 03_05_1071 + 30133696-30133874,30134294-30135200,30135224-301353... 27 2.8 02_05_0449 - 29107310-29107377,29107732-29107777,29107860-291079... 26 3.7 02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 26 3.7 12_02_0628 + 21357876-21359921 26 5.0 11_06_0610 - 25449085-25453284 26 5.0 06_01_1096 - 8988463-8989167,8989335-8989361,8989560-8989648,898... 26 5.0 05_04_0131 + 18290201-18290650,18291474-18291626,18291950-182920... 26 5.0 03_02_0996 - 13082540-13082818,13083107-13083221,13084135-130842... 26 5.0 12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 25 6.5 04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 25 6.5 07_03_0710 - 20873420-20874745 25 8.7 07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 25 8.7 06_01_0541 - 3874476-3874694,3874816-3874868,3875944-3876055,387... 25 8.7 06_01_0531 - 3836420-3836638,3836760-3836812,3837888-3837999,383... 25 8.7 01_01_0635 - 4795434-4795461,4795897-4797365 25 8.7 >07_03_0786 + 21510477-21511451,21512272-21512499 Length = 400 Score = 32.3 bits (70), Expect = 0.057 Identities = 17/38 (44%), Positives = 20/38 (52%) Frame = +1 Query: 148 RKRKRPKNLPGRKRMRPHRPRKCAPVVLTGFGGLQTLR 261 RK K + L G K +RP PR C P VL G Q+ R Sbjct: 307 RKGKILQELRGPKNVRPTEPRGCLPAVLRRANGHQSRR 344 >03_06_0295 - 32897545-32897805,32897859-32898714,32898843-32899096 Length = 456 Score = 31.1 bits (67), Expect = 0.13 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +1 Query: 175 PGRKRMRPHRPRKCAPVVLTGFGGLQTL 258 PG R+R + R C P L GFG L TL Sbjct: 143 PGASRLRRLKLRNCLPPPLQGFGSLATL 170 >08_01_1072 + 10954080-10954851,10954956-10955027,10955108-10955191, 10955285-10955353,10955814-10955916,10956033-10956107, 10956204-10956366,10956502-10956571,10956649-10956735, 10956795-10956836,10956904-10956969,10957201-10957275, 10960149-10960271,10960683-10960966 Length = 694 Score = 28.7 bits (61), Expect = 0.70 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +3 Query: 132 GATETPQEETPEKSTGEKKDETPPPKEMRARSTYRFR 242 G E+PQEETP +S+ K + P + A + R R Sbjct: 636 GDDESPQEETPARSSPAKAHDHEPAQGFGAAAPARHR 672 >10_02_0004 - 4055613-4055903 Length = 96 Score = 26.6 bits (56), Expect = 2.8 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +1 Query: 136 LLKHRKRKRPKNLPGRKRMRPHRPRKCAPVVL 231 LL HR R+RP P R+R+ H P+VL Sbjct: 16 LLPHR-RQRPPTAPPRRRLLHHAVVDIHPIVL 46 >09_06_0048 + 20477076-20478547,20478643-20478722,20478880-20478893, 20480164-20481199,20481275-20481402,20481673-20481732, 20481774-20481878,20481971-20482055,20482315-20482470, 20482562-20482831,20482877-20483671,20483844-20483903, 20484062-20485134 Length = 1777 Score = 26.6 bits (56), Expect = 2.8 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Frame = +3 Query: 141 ETPQEETPEKSTGEKKDETPPPKEMRARS-TYRFRGSSNVKILKKP 275 + P+E+ + E D+ PPP + R R SS +++ KP Sbjct: 420 DIPEEDAVQIDEDEDDDDVPPPLTRKGGGRRKRGRASSKAQVVVKP 465 >08_02_1580 + 28002552-28002653,28002900-28002979,28003074-28003326 Length = 144 Score = 26.6 bits (56), Expect = 2.8 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +3 Query: 135 ATETPQEETPEKSTGEKKDETP 200 ATE P E+ P S GEKK P Sbjct: 2 ATEQPSEKKPPASGGEKKAPLP 23 >06_02_0173 - 12601025-12601071,12601632-12601698,12601857-12601934, 12602235-12602396,12603309-12603440,12604604-12604656, 12605808-12606372 Length = 367 Score = 26.6 bits (56), Expect = 2.8 Identities = 10/29 (34%), Positives = 16/29 (55%) Frame = +1 Query: 136 LLKHRKRKRPKNLPGRKRMRPHRPRKCAP 222 +L H+KR RP +++ RP + AP Sbjct: 160 VLPHKKRGRPPGSGNKQQQRPQHKKAAAP 188 >03_05_1071 + 30133696-30133874,30134294-30135200,30135224-30135358, 30135545-30136553,30136699-30136703 Length = 744 Score = 26.6 bits (56), Expect = 2.8 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +1 Query: 139 LKHRKRKRPKNLPGRKRMRPHRP 207 L+HR R RPK L K P+RP Sbjct: 53 LRHRGRNRPKGLAFPKPNIPYRP 75 >02_05_0449 - 29107310-29107377,29107732-29107777,29107860-29107934, 29108053-29108122,29108313-29108408,29108728-29108914, 29109001-29109169,29109614-29109646,29109731-29109841, 29110070-29111256,29112380-29112448,29114417-29114975, 29115455-29115589,29115714-29115896 Length = 995 Score = 26.2 bits (55), Expect = 3.7 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +2 Query: 2 GSLVRASFAAERYSFRSTRPYH 67 G LVRAS AA +F RP+H Sbjct: 21 GCLVRASLAAGHPTFALVRPHH 42 >02_04_0179 + 20682852-20684510,20684593-20684661,20684741-20684809, 20686779-20688206 Length = 1074 Score = 26.2 bits (55), Expect = 3.7 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +3 Query: 135 ATETPQEETPEKSTGEKKDETPPP 206 A+E P+++T EKK + PPP Sbjct: 82 ASEPTAPPEPQRATEEKKGDEPPP 105 >12_02_0628 + 21357876-21359921 Length = 681 Score = 25.8 bits (54), Expect = 5.0 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +3 Query: 168 KSTGEKKDETPPPKEMRARSTYR 236 K+ ++D +PPP RARS+ R Sbjct: 193 KADKSRRDSSPPPPPSRARSSAR 215 >11_06_0610 - 25449085-25453284 Length = 1399 Score = 25.8 bits (54), Expect = 5.0 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +3 Query: 141 ETPQEETPEKSTGEKKDETPPP 206 ++P TPE S+ K+ PPP Sbjct: 896 KSPPSHTPESSSPPSKESEPPP 917 >06_01_1096 - 8988463-8989167,8989335-8989361,8989560-8989648, 8989830-8990039,8990877-8991047,8991595-8991777, 8991886-8991969,8992067-8992178 Length = 526 Score = 25.8 bits (54), Expect = 5.0 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 3/28 (10%) Frame = +3 Query: 189 DETPPPKEMRA---RSTYRFRGSSNVKI 263 DETPPP +MRA R Y F K+ Sbjct: 388 DETPPPLDMRAATPRKNYAFMTKEPEKV 415 >05_04_0131 + 18290201-18290650,18291474-18291626,18291950-18292042, 18292285-18292313,18292702-18292795,18292941-18293153 Length = 343 Score = 25.8 bits (54), Expect = 5.0 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = +3 Query: 141 ETPQEETPEKSTGEKKDETPP 203 ET + T EK K DETPP Sbjct: 98 ETSRSTTEEKKEENKPDETPP 118 >03_02_0996 - 13082540-13082818,13083107-13083221,13084135-13084235, 13084890-13085117,13085789-13086106,13086200-13086484, 13086566-13086913 Length = 557 Score = 25.8 bits (54), Expect = 5.0 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +3 Query: 135 ATETPQEETPEKSTGEKKDETPPPKEMRARST 230 A + EE E+ EKK P +E RARS+ Sbjct: 29 AEKAAAEEEEEEEEEEKKPPKPARRERRARSS 60 >12_02_0340 - 17725866-17725884,17726046-17726326,17726842-17726928, 17727018-17727113,17728484-17728585,17728720-17728762, 17728834-17728952,17729348-17729444,17730153-17730214, 17730370-17730432,17730847-17730949,17731402-17731497, 17731594-17731742,17732356-17732529,17733078-17733156, 17733807-17733913,17733994-17734062,17734879-17735043, 17735206-17735703 Length = 802 Score = 25.4 bits (53), Expect = 6.5 Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%) Frame = +1 Query: 139 LKHRKRK-RPKNLPGRKRMRPHRPRK 213 LK +KR+ R KNLP +KR R R+ Sbjct: 665 LKEKKRREREKNLPRKKRRRLEAERE 690 >04_04_1188 + 31579833-31579914,31580001-31580176,31580822-31580923, 31581015-31581245,31581821-31581922,31582092-31582184, 31582275-31582379,31582455-31582514,31582621-31582698, 31582778-31582924,31583011-31583109,31583178-31583267, 31583360-31583451,31583529-31583646,31583783-31583871, 31583998-31584088,31584203-31584294,31584442-31584749, 31584866-31584897 Length = 728 Score = 25.4 bits (53), Expect = 6.5 Identities = 10/42 (23%), Positives = 21/42 (50%) Frame = +3 Query: 150 QEETPEKSTGEKKDETPPPKEMRARSTYRFRGSSNVKILKKP 275 ++ P K +K + PPPK++ + S+ S ++ +P Sbjct: 50 EKVVPSKEEAKKVKKQPPPKKVESSSSEEDSSESEEEVKAQP 91 >07_03_0710 - 20873420-20874745 Length = 441 Score = 25.0 bits (52), Expect = 8.7 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%) Frame = -3 Query: 92 GVRT-LSHFDDRGGWI*TSSVR 30 GVR L+H DDRGG++ VR Sbjct: 24 GVRLELTHADDRGGYVGAERVR 45 >07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371, 18577344-18577458,18578179-18578333,18578673-18580621, 18580691-18581372,18581550-18581621,18582558-18583199, 18583301-18583402,18585011-18585100 Length = 2192 Score = 25.0 bits (52), Expect = 8.7 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 4/50 (8%) Frame = +3 Query: 135 ATETPQEETPEKSTGEKKDETPPPK----EMRARSTYRFRGSSNVKILKK 272 A++ + + E ST + E+PPPK + R ++ +G VK + K Sbjct: 225 ASDVDSDSSMEPSTSLEHSESPPPKRKSLDGRTPASSTKKGKKKVKFVDK 274 >06_01_0541 - 3874476-3874694,3874816-3874868,3875944-3876055, 3876143-3876321,3876358-3877195 Length = 466 Score = 25.0 bits (52), Expect = 8.7 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +3 Query: 159 TPEKSTGEKKDETPPPKEMRARSTYRFR 242 TP S + E+PPP ++R RS + FR Sbjct: 62 TPPSSPPRRIPESPPPDDVR-RSLHLFR 88 >06_01_0531 - 3836420-3836638,3836760-3836812,3837888-3837999, 3838087-3838265,3838302-3839139 Length = 466 Score = 25.0 bits (52), Expect = 8.7 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +3 Query: 159 TPEKSTGEKKDETPPPKEMRARSTYRFR 242 TP S + E+PPP ++R RS + FR Sbjct: 62 TPPSSPPRRIPESPPPDDVR-RSLHLFR 88 >01_01_0635 - 4795434-4795461,4795897-4797365 Length = 498 Score = 25.0 bits (52), Expect = 8.7 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = +2 Query: 83 YGRRRDSSTGEDPDR 127 YG RRDS G+D DR Sbjct: 80 YGARRDSFRGDDRDR 94 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,916,943 Number of Sequences: 37544 Number of extensions: 132809 Number of successful extensions: 560 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 539 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 559 length of database: 14,793,348 effective HSP length: 69 effective length of database: 12,202,812 effective search space used: 268461864 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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