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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0878
         (277 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0786 + 21510477-21511451,21512272-21512499                       32   0.057
03_06_0295 - 32897545-32897805,32897859-32898714,32898843-32899096     31   0.13 
08_01_1072 + 10954080-10954851,10954956-10955027,10955108-109551...    29   0.70 
10_02_0004 - 4055613-4055903                                           27   2.8  
09_06_0048 + 20477076-20478547,20478643-20478722,20478880-204788...    27   2.8  
08_02_1580 + 28002552-28002653,28002900-28002979,28003074-28003326     27   2.8  
06_02_0173 - 12601025-12601071,12601632-12601698,12601857-126019...    27   2.8  
03_05_1071 + 30133696-30133874,30134294-30135200,30135224-301353...    27   2.8  
02_05_0449 - 29107310-29107377,29107732-29107777,29107860-291079...    26   3.7  
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848...    26   3.7  
12_02_0628 + 21357876-21359921                                         26   5.0  
11_06_0610 - 25449085-25453284                                         26   5.0  
06_01_1096 - 8988463-8989167,8989335-8989361,8989560-8989648,898...    26   5.0  
05_04_0131 + 18290201-18290650,18291474-18291626,18291950-182920...    26   5.0  
03_02_0996 - 13082540-13082818,13083107-13083221,13084135-130842...    26   5.0  
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269...    25   6.5  
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809...    25   6.5  
07_03_0710 - 20873420-20874745                                         25   8.7  
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753...    25   8.7  
06_01_0541 - 3874476-3874694,3874816-3874868,3875944-3876055,387...    25   8.7  
06_01_0531 - 3836420-3836638,3836760-3836812,3837888-3837999,383...    25   8.7  
01_01_0635 - 4795434-4795461,4795897-4797365                           25   8.7  

>07_03_0786 + 21510477-21511451,21512272-21512499
          Length = 400

 Score = 32.3 bits (70), Expect = 0.057
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = +1

Query: 148 RKRKRPKNLPGRKRMRPHRPRKCAPVVLTGFGGLQTLR 261
           RK K  + L G K +RP  PR C P VL    G Q+ R
Sbjct: 307 RKGKILQELRGPKNVRPTEPRGCLPAVLRRANGHQSRR 344


>03_06_0295 - 32897545-32897805,32897859-32898714,32898843-32899096
          Length = 456

 Score = 31.1 bits (67), Expect = 0.13
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +1

Query: 175 PGRKRMRPHRPRKCAPVVLTGFGGLQTL 258
           PG  R+R  + R C P  L GFG L TL
Sbjct: 143 PGASRLRRLKLRNCLPPPLQGFGSLATL 170


>08_01_1072 +
           10954080-10954851,10954956-10955027,10955108-10955191,
           10955285-10955353,10955814-10955916,10956033-10956107,
           10956204-10956366,10956502-10956571,10956649-10956735,
           10956795-10956836,10956904-10956969,10957201-10957275,
           10960149-10960271,10960683-10960966
          Length = 694

 Score = 28.7 bits (61), Expect = 0.70
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 132 GATETPQEETPEKSTGEKKDETPPPKEMRARSTYRFR 242
           G  E+PQEETP +S+  K  +  P +   A +  R R
Sbjct: 636 GDDESPQEETPARSSPAKAHDHEPAQGFGAAAPARHR 672


>10_02_0004 - 4055613-4055903
          Length = 96

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +1

Query: 136 LLKHRKRKRPKNLPGRKRMRPHRPRKCAPVVL 231
           LL HR R+RP   P R+R+  H      P+VL
Sbjct: 16  LLPHR-RQRPPTAPPRRRLLHHAVVDIHPIVL 46


>09_06_0048 +
           20477076-20478547,20478643-20478722,20478880-20478893,
           20480164-20481199,20481275-20481402,20481673-20481732,
           20481774-20481878,20481971-20482055,20482315-20482470,
           20482562-20482831,20482877-20483671,20483844-20483903,
           20484062-20485134
          Length = 1777

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 141 ETPQEETPEKSTGEKKDETPPPKEMRARS-TYRFRGSSNVKILKKP 275
           + P+E+  +    E  D+ PPP   +      R R SS  +++ KP
Sbjct: 420 DIPEEDAVQIDEDEDDDDVPPPLTRKGGGRRKRGRASSKAQVVVKP 465


>08_02_1580 + 28002552-28002653,28002900-28002979,28003074-28003326
          Length = 144

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 135 ATETPQEETPEKSTGEKKDETP 200
           ATE P E+ P  S GEKK   P
Sbjct: 2   ATEQPSEKKPPASGGEKKAPLP 23


>06_02_0173 -
           12601025-12601071,12601632-12601698,12601857-12601934,
           12602235-12602396,12603309-12603440,12604604-12604656,
           12605808-12606372
          Length = 367

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 136 LLKHRKRKRPKNLPGRKRMRPHRPRKCAP 222
           +L H+KR RP     +++ RP   +  AP
Sbjct: 160 VLPHKKRGRPPGSGNKQQQRPQHKKAAAP 188


>03_05_1071 +
           30133696-30133874,30134294-30135200,30135224-30135358,
           30135545-30136553,30136699-30136703
          Length = 744

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 139 LKHRKRKRPKNLPGRKRMRPHRP 207
           L+HR R RPK L   K   P+RP
Sbjct: 53  LRHRGRNRPKGLAFPKPNIPYRP 75


>02_05_0449 -
          29107310-29107377,29107732-29107777,29107860-29107934,
          29108053-29108122,29108313-29108408,29108728-29108914,
          29109001-29109169,29109614-29109646,29109731-29109841,
          29110070-29111256,29112380-29112448,29114417-29114975,
          29115455-29115589,29115714-29115896
          Length = 995

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +2

Query: 2  GSLVRASFAAERYSFRSTRPYH 67
          G LVRAS AA   +F   RP+H
Sbjct: 21 GCLVRASLAAGHPTFALVRPHH 42


>02_04_0179 +
           20682852-20684510,20684593-20684661,20684741-20684809,
           20686779-20688206
          Length = 1074

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 135 ATETPQEETPEKSTGEKKDETPPP 206
           A+E      P+++T EKK + PPP
Sbjct: 82  ASEPTAPPEPQRATEEKKGDEPPP 105


>12_02_0628 + 21357876-21359921
          Length = 681

 Score = 25.8 bits (54), Expect = 5.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 168 KSTGEKKDETPPPKEMRARSTYR 236
           K+   ++D +PPP   RARS+ R
Sbjct: 193 KADKSRRDSSPPPPPSRARSSAR 215


>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 25.8 bits (54), Expect = 5.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 141 ETPQEETPEKSTGEKKDETPPP 206
           ++P   TPE S+   K+  PPP
Sbjct: 896 KSPPSHTPESSSPPSKESEPPP 917


>06_01_1096 -
           8988463-8989167,8989335-8989361,8989560-8989648,
           8989830-8990039,8990877-8991047,8991595-8991777,
           8991886-8991969,8992067-8992178
          Length = 526

 Score = 25.8 bits (54), Expect = 5.0
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
 Frame = +3

Query: 189 DETPPPKEMRA---RSTYRFRGSSNVKI 263
           DETPPP +MRA   R  Y F      K+
Sbjct: 388 DETPPPLDMRAATPRKNYAFMTKEPEKV 415


>05_04_0131 +
           18290201-18290650,18291474-18291626,18291950-18292042,
           18292285-18292313,18292702-18292795,18292941-18293153
          Length = 343

 Score = 25.8 bits (54), Expect = 5.0
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 141 ETPQEETPEKSTGEKKDETPP 203
           ET +  T EK    K DETPP
Sbjct: 98  ETSRSTTEEKKEENKPDETPP 118


>03_02_0996 -
           13082540-13082818,13083107-13083221,13084135-13084235,
           13084890-13085117,13085789-13086106,13086200-13086484,
           13086566-13086913
          Length = 557

 Score = 25.8 bits (54), Expect = 5.0
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 135 ATETPQEETPEKSTGEKKDETPPPKEMRARST 230
           A +   EE  E+   EKK   P  +E RARS+
Sbjct: 29  AEKAAAEEEEEEEEEEKKPPKPARRERRARSS 60


>12_02_0340 -
           17725866-17725884,17726046-17726326,17726842-17726928,
           17727018-17727113,17728484-17728585,17728720-17728762,
           17728834-17728952,17729348-17729444,17730153-17730214,
           17730370-17730432,17730847-17730949,17731402-17731497,
           17731594-17731742,17732356-17732529,17733078-17733156,
           17733807-17733913,17733994-17734062,17734879-17735043,
           17735206-17735703
          Length = 802

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +1

Query: 139 LKHRKRK-RPKNLPGRKRMRPHRPRK 213
           LK +KR+ R KNLP +KR R    R+
Sbjct: 665 LKEKKRREREKNLPRKKRRRLEAERE 690


>04_04_1188 +
           31579833-31579914,31580001-31580176,31580822-31580923,
           31581015-31581245,31581821-31581922,31582092-31582184,
           31582275-31582379,31582455-31582514,31582621-31582698,
           31582778-31582924,31583011-31583109,31583178-31583267,
           31583360-31583451,31583529-31583646,31583783-31583871,
           31583998-31584088,31584203-31584294,31584442-31584749,
           31584866-31584897
          Length = 728

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 10/42 (23%), Positives = 21/42 (50%)
 Frame = +3

Query: 150 QEETPEKSTGEKKDETPPPKEMRARSTYRFRGSSNVKILKKP 275
           ++  P K   +K  + PPPK++ + S+      S  ++  +P
Sbjct: 50  EKVVPSKEEAKKVKKQPPPKKVESSSSEEDSSESEEEVKAQP 91


>07_03_0710 - 20873420-20874745
          Length = 441

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = -3

Query: 92 GVRT-LSHFDDRGGWI*TSSVR 30
          GVR  L+H DDRGG++    VR
Sbjct: 24 GVRLELTHADDRGGYVGAERVR 45


>07_03_0481 -
           18572206-18574314,18574591-18575185,18575304-18575371,
           18577344-18577458,18578179-18578333,18578673-18580621,
           18580691-18581372,18581550-18581621,18582558-18583199,
           18583301-18583402,18585011-18585100
          Length = 2192

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = +3

Query: 135 ATETPQEETPEKSTGEKKDETPPPK----EMRARSTYRFRGSSNVKILKK 272
           A++   + + E ST  +  E+PPPK    + R  ++   +G   VK + K
Sbjct: 225 ASDVDSDSSMEPSTSLEHSESPPPKRKSLDGRTPASSTKKGKKKVKFVDK 274


>06_01_0541 -
           3874476-3874694,3874816-3874868,3875944-3876055,
           3876143-3876321,3876358-3877195
          Length = 466

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 159 TPEKSTGEKKDETPPPKEMRARSTYRFR 242
           TP  S   +  E+PPP ++R RS + FR
Sbjct: 62  TPPSSPPRRIPESPPPDDVR-RSLHLFR 88


>06_01_0531 -
           3836420-3836638,3836760-3836812,3837888-3837999,
           3838087-3838265,3838302-3839139
          Length = 466

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 159 TPEKSTGEKKDETPPPKEMRARSTYRFR 242
           TP  S   +  E+PPP ++R RS + FR
Sbjct: 62  TPPSSPPRRIPESPPPDDVR-RSLHLFR 88


>01_01_0635 - 4795434-4795461,4795897-4797365
          Length = 498

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +2

Query: 83  YGRRRDSSTGEDPDR 127
           YG RRDS  G+D DR
Sbjct: 80  YGARRDSFRGDDRDR 94


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,916,943
Number of Sequences: 37544
Number of extensions: 132809
Number of successful extensions: 560
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 14,793,348
effective HSP length: 69
effective length of database: 12,202,812
effective search space used: 268461864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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