Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0878
(277 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69304-1|CAI42009.1| 638|Homo sapiens zinc finger, matrin type ... 31 0.65
Z68868-2|CAI42751.1| 638|Homo sapiens zinc finger, matrin type ... 31 0.65
AB058692-1|BAB47418.1| 477|Homo sapiens KIAA1789 protein protein. 31 0.65
M63180-1|AAB04939.1| 712|Homo sapiens threonyl-tRNA synthetase ... 30 1.5
AJ277892-6|CAD12460.1| 454|Homo sapiens Titin fetal Isoform pro... 29 2.0
AF321609-1|AAT09768.1| 834|Homo sapiens titin protein. 29 2.0
U80458-1|AAD00355.1| 1604|Homo sapiens microtubule associated pr... 28 6.1
U38292-1|AAB41133.1| 2805|Homo sapiens microtubule-associated pr... 28 6.1
U38291-1|AAB41132.1| 2805|Homo sapiens microtubule-associated pr... 28 6.1
AF200415-1|AAF08305.2| 1825|Homo sapiens proliferation-related p... 28 6.1
>Z69304-1|CAI42009.1| 638|Homo sapiens zinc finger, matrin type 1
protein.
Length = 638
Score = 31.1 bits (67), Expect = 0.65
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 139 LKHRKRKRPKNLPGRKRMRPHRPRK 213
LKHRK+K+ ++P K R HR K
Sbjct: 593 LKHRKKKKSHDVPSEKEERKHRKEK 617
>Z68868-2|CAI42751.1| 638|Homo sapiens zinc finger, matrin type 1
protein.
Length = 638
Score = 31.1 bits (67), Expect = 0.65
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 139 LKHRKRKRPKNLPGRKRMRPHRPRK 213
LKHRK+K+ ++P K R HR K
Sbjct: 593 LKHRKKKKSHDVPSEKEERKHRKEK 617
>AB058692-1|BAB47418.1| 477|Homo sapiens KIAA1789 protein protein.
Length = 477
Score = 31.1 bits (67), Expect = 0.65
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 139 LKHRKRKRPKNLPGRKRMRPHRPRK 213
LKHRK+K+ ++P K R HR K
Sbjct: 432 LKHRKKKKSHDVPSEKEERKHRKEK 456
>M63180-1|AAB04939.1| 712|Homo sapiens threonyl-tRNA synthetase
protein.
Length = 712
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +1
Query: 160 RPKNLPGRKRMRPHRPR--KCAPVVLTGFGGL 249
+P N PG M HRPR + P+ L FGGL
Sbjct: 397 KPMNCPGHSLMFDHRPRSWRELPLRLADFGGL 428
>AJ277892-6|CAD12460.1| 454|Homo sapiens Titin fetal Isoform
protein.
Length = 454
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +3
Query: 147 PQEETPEKSTG---EKKDETPPPKEMRARSTYRFRGSSNVKILKKP 275
P+E PEK KK E PPPK A ++V + KKP
Sbjct: 348 PKEVVPEKKVPVPPAKKPEAPPPKVPEAPKEVVLEKKASVAVPKKP 393
>AF321609-1|AAT09768.1| 834|Homo sapiens titin protein.
Length = 834
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +3
Query: 147 PQEETPEKSTG---EKKDETPPPKEMRARSTYRFRGSSNVKILKKP 275
P+E PEK KK E PPPK A ++V + KKP
Sbjct: 514 PKEVVPEKKVPVPPAKKPEAPPPKVPEAPKEVVLEKKASVAVPKKP 559
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +3
Query: 147 PQEETPEKSTG---EKKDETPPPKEMRARSTYRFRGSSNVKILKKP 275
P+E PEK KK E PPPK A ++V + KKP
Sbjct: 711 PKEVVPEKKVPVPPAKKPEAPPPKVPEAPKEVVLEKKASVAVPKKP 756
>U80458-1|AAD00355.1| 1604|Homo sapiens microtubule associated protein
1A protein.
Length = 1604
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 126 ENGATETPQEETPEKSTGEKKDETPPPKEMRAR 224
E+ A ET + PE+ T EK+++ PPP+ +A+
Sbjct: 965 EDAAEETVKPG-PEEGTLEKEEKVPPPRSPQAQ 996
>U38292-1|AAB41133.1| 2805|Homo sapiens microtubule-associated protein
1a protein.
Length = 2805
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 126 ENGATETPQEETPEKSTGEKKDETPPPKEMRAR 224
E+ A ET + PE+ T EK+++ PPP+ +A+
Sbjct: 1042 EDAAEETVKPG-PEEGTLEKEEKVPPPRSPQAQ 1073
>U38291-1|AAB41132.1| 2805|Homo sapiens microtubule-associated protein
1a protein.
Length = 2805
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 126 ENGATETPQEETPEKSTGEKKDETPPPKEMRAR 224
E+ A ET + PE+ T EK+++ PPP+ +A+
Sbjct: 1042 EDAAEETVKPG-PEEGTLEKEEKVPPPRSPQAQ 1073
>AF200415-1|AAF08305.2| 1825|Homo sapiens proliferation-related
protein P80 protein.
Length = 1825
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 126 ENGATETPQEETPEKSTGEKKDETPPPKEMRAR 224
E+ A ET + PE+ T EK+++ PPP+ +A+
Sbjct: 1042 EDAAEETVKPG-PEEGTLEKEEKVPPPRSPQAQ 1073
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,151,733
Number of Sequences: 237096
Number of extensions: 648257
Number of successful extensions: 3073
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3060
length of database: 76,859,062
effective HSP length: 69
effective length of database: 60,499,438
effective search space used: 1330987636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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