Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0878
(277 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 29 0.47
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 29 0.47
AC024791-4|AAK95890.1| 1186|Caenorhabditis elegans Msh (muts hom... 29 0.62
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 28 0.82
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 28 1.1
AF043697-6|AAB97554.1| 161|Caenorhabditis elegans Hypothetical ... 28 1.1
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 28 1.1
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 28 1.1
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 1.1
Z78063-3|CAB01502.1| 236|Caenorhabditis elegans Hypothetical pr... 27 1.4
Z72515-1|CAA96681.1| 419|Caenorhabditis elegans Hypothetical pr... 27 1.4
Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical pr... 27 1.9
Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical p... 27 2.5
Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr... 27 2.5
AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical ... 27 2.5
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ... 27 2.5
AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein. 27 2.5
AL032644-1|CAA21666.2| 604|Caenorhabditis elegans Hypothetical ... 26 4.4
AL032637-20|CAA21612.2| 250|Caenorhabditis elegans Hypothetical... 26 4.4
AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical ... 26 4.4
Z46996-4|CAA87095.2| 101|Caenorhabditis elegans Hypothetical pr... 25 5.8
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr... 25 7.7
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 25 7.7
Z46267-16|CAO78720.1| 576|Caenorhabditis elegans Hypothetical p... 25 7.7
Z46267-4|CAD45594.1| 517|Caenorhabditis elegans Hypothetical pr... 25 7.7
Z46267-3|CAA86421.3| 522|Caenorhabditis elegans Hypothetical pr... 25 7.7
L10986-6|AAA28015.1| 262|Caenorhabditis elegans Hypothetical pr... 25 7.7
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 29.1 bits (62), Expect = 0.47
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +3
Query: 132 GATETPQEETPEKSTGEKKDETPPPKEMRARSTYRF 239
G + ++++ + + EKK+E PPP ++ YR+
Sbjct: 2 GLFKKKKDDSSSEGSSEKKEEAPPPPKISIFQLYRY 37
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 29.1 bits (62), Expect = 0.47
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +3
Query: 132 GATETPQEETPEKSTGEKKDETPPPKEMRARSTYRF 239
G + ++++ + + EKK+E PPP ++ YR+
Sbjct: 2 GLFKKKKDDSSSEGSSEKKEEAPPPPKISIFQLYRY 37
>AC024791-4|AAK95890.1| 1186|Caenorhabditis elegans Msh (muts
homolog) family protein 6 protein.
Length = 1186
Score = 28.7 bits (61), Expect = 0.62
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 138 TETPQEETPEKSTGEKKDETPPPKEMRARSTYRFRGSSNVKILKK 272
T+TP+ E PE+ EK E PK ++ T + S K+LK+
Sbjct: 13 TKTPKSEKPEEEVKEKSVE--EPKSLK-NDTPKISNDSEKKVLKR 54
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 28.3 bits (60), Expect = 0.82
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 41 SFRSTR--PYHQND*EYGRRRDSSTGEDPDRKWCY*NTARGNARKIYRGEKG 190
SF +T P ++ +RRD+ G++ +W + N A+ R +Y+G +G
Sbjct: 223 SFSTTACCPLVSSEDRCAQRRDTGEGDELVARWYFDNQAKECRRFLYKGIRG 274
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.9 bits (59), Expect = 1.1
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 126 ENGATETPQEETPEKSTGEKKDETPPPKEMRARSTYRFRG-SSNVKILKKP 275
E A+ T +E+TPEKS E+ ++P KE S + G S K +KP
Sbjct: 1803 EKPASPTKKEKTPEKSAAEEL-KSPTKKEKSPSSPTKKTGDESKEKSPEKP 1852
>AF043697-6|AAB97554.1| 161|Caenorhabditis elegans Hypothetical
protein F56C11.3 protein.
Length = 161
Score = 27.9 bits (59), Expect = 1.1
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 153 EETPEKSTGEKKDETPPPKEMRARSTYRFRGSSNVKILKKP 275
E TP STG K P K+ RST+ + +V +KP
Sbjct: 36 ETTPSTSTGAKLHGCPVDKDELGRSTWNLLHTMSVYYPEKP 76
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.9 bits (59), Expect = 1.1
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 126 ENGATETPQEETPEKSTGEKKDETPPPKEMRARSTYRFRG-SSNVKILKKP 275
E A+ T +E+TPEKS E+ ++P KE S + G S K +KP
Sbjct: 1803 EKPASPTKKEKTPEKSAAEEL-KSPTKKEKSPSSPTKKTGDESKEKSPEKP 1852
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.9 bits (59), Expect = 1.1
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 126 ENGATETPQEETPEKSTGEKKDETPPPKEMRARSTYRFRG-SSNVKILKKP 275
E A+ T +E+TPEKS E+ ++P KE S + G S K +KP
Sbjct: 1803 EKPASPTKKEKTPEKSAAEEL-KSPTKKEKSPSSPTKKTGDESKEKSPEKP 1852
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.9 bits (59), Expect = 1.1
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 126 ENGATETPQEETPEKSTGEKKDETPPPKEMRARSTYRFRG-SSNVKILKKP 275
E A+ T +E+TPEKS E+ ++P KE S + G S K +KP
Sbjct: 1803 EKPASPTKKEKTPEKSAAEEL-KSPTKKEKSPSSPTKKTGDESKEKSPEKP 1852
>Z78063-3|CAB01502.1| 236|Caenorhabditis elegans Hypothetical
protein F45D3.3 protein.
Length = 236
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 157 KRPKNLPGRKRMRP--HRPRKCAPVVLTGFGG 246
K+ + LPG+K+M+P +P AP GF G
Sbjct: 62 KKSEKLPGQKKMKPEFQQPEGVAPEFTGGFMG 93
>Z72515-1|CAA96681.1| 419|Caenorhabditis elegans Hypothetical
protein T11A5.1 protein.
Length = 419
Score = 27.5 bits (58), Expect = 1.4
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 150 QEETPEKSTGEKKDETPPPKEMRARST 230
++ +PE+S+ E + TP PK+ AR T
Sbjct: 5 RKPSPERSSDEDEVSTPSPKDRTARPT 31
>Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical
protein K08F4.5 protein.
Length = 215
Score = 27.1 bits (57), Expect = 1.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 141 ETPQEETPEKSTGEKKDET 197
E P+E+ PEK EKKD T
Sbjct: 70 EEPKEKVPEKKEEEKKDAT 88
>Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical protein
T01H8.5d protein.
Length = 1931
Score = 26.6 bits (56), Expect = 2.5
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 159 TPEKST-GEKKDETPPPKEMRARSTYRFRGSSNV 257
T E T GE +PPP MRA S R+ S++
Sbjct: 1119 TAEYGTFGESNGVSPPPPYMRANSRSRYNNRSDM 1152
>Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical protein
T01H8.5c protein.
Length = 1971
Score = 26.6 bits (56), Expect = 2.5
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 159 TPEKST-GEKKDETPPPKEMRARSTYRFRGSSNV 257
T E T GE +PPP MRA S R+ S++
Sbjct: 1159 TAEYGTFGESNGVSPPPPYMRANSRSRYNNRSDM 1192
>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical protein
T01H8.5a protein.
Length = 2032
Score = 26.6 bits (56), Expect = 2.5
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 159 TPEKST-GEKKDETPPPKEMRARSTYRFRGSSNV 257
T E T GE +PPP MRA S R+ S++
Sbjct: 1220 TAEYGTFGESNGVSPPPPYMRANSRSRYNNRSDM 1253
>Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 26.6 bits (56), Expect = 2.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 265 SILTFEDPRNR*VLRARISLGGG 197
S LT EDP+N +L+ +L GG
Sbjct: 549 SALTIEDPKNAEILKITATLSGG 571
>Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 26.6 bits (56), Expect = 2.5
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 159 TPEKST-GEKKDETPPPKEMRARSTYRFRGSSNV 257
T E T GE +PPP MRA S R+ S++
Sbjct: 1119 TAEYGTFGESNGVSPPPPYMRANSRSRYNNRSDM 1152
>Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical protein
T01H8.5c protein.
Length = 1971
Score = 26.6 bits (56), Expect = 2.5
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 159 TPEKST-GEKKDETPPPKEMRARSTYRFRGSSNV 257
T E T GE +PPP MRA S R+ S++
Sbjct: 1159 TAEYGTFGESNGVSPPPPYMRANSRSRYNNRSDM 1192
>Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical protein
T01H8.5a protein.
Length = 2032
Score = 26.6 bits (56), Expect = 2.5
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 159 TPEKST-GEKKDETPPPKEMRARSTYRFRGSSNV 257
T E T GE +PPP MRA S R+ S++
Sbjct: 1220 TAEYGTFGESNGVSPPPPYMRANSRSRYNNRSDM 1253
>AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 26.6 bits (56), Expect = 2.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 265 SILTFEDPRNR*VLRARISLGGG 197
S LT EDP+N +L+ +L GG
Sbjct: 549 SALTIEDPKNAEILKITATLSGG 571
>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1971
Score = 26.6 bits (56), Expect = 2.5
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 159 TPEKST-GEKKDETPPPKEMRARSTYRFRGSSNV 257
T E T GE +PPP MRA S R+ S++
Sbjct: 1159 TAEYGTFGESNGVSPPPPYMRANSRSRYNNRSDM 1192
>AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein.
Length = 542
Score = 26.6 bits (56), Expect = 2.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 265 SILTFEDPRNR*VLRARISLGGG 197
S LT EDP+N +L+ +L GG
Sbjct: 485 SALTIEDPKNAEILKITATLSGG 507
>AL032644-1|CAA21666.2| 604|Caenorhabditis elegans Hypothetical
protein Y51H1A.2 protein.
Length = 604
Score = 25.8 bits (54), Expect = 4.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 154 RKRPKNLPGRKRMRPHRPRK 213
R +P ++PG +R HRP+K
Sbjct: 559 RSQPMSIPGGRRQLIHRPQK 578
>AL032637-20|CAA21612.2| 250|Caenorhabditis elegans Hypothetical
protein Y43F8C.10 protein.
Length = 250
Score = 25.8 bits (54), Expect = 4.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 144 TPQEETPEKSTGEKKDETPPPKEMR 218
T Q ET +S+GE KD+ PKE R
Sbjct: 91 TSQSETTNESSGEDKDD-GKPKERR 114
>AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical
protein Y59E9AL.4 protein.
Length = 1100
Score = 25.8 bits (54), Expect = 4.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 142 KHRKRKRPKNLPGRKRMRPHRPRKCA 219
K RK R +NL R+R+ R RKCA
Sbjct: 1052 KRRKVLRNQNLSRRRRIGGGRGRKCA 1077
>Z46996-4|CAA87095.2| 101|Caenorhabditis elegans Hypothetical
protein C34C12.4 protein.
Length = 101
Score = 25.4 bits (53), Expect = 5.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 144 TPQEETPEKSTGEKKDETPPP 206
T + EK TG D TPPP
Sbjct: 75 TADDAAIEKPTGSSDDNTPPP 95
>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical
protein C04A11.3 protein.
Length = 1228
Score = 25.0 bits (52), Expect = 7.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 141 ETPQEETPEKSTGEKKDETPPPKEMRA 221
ETP +TP K K+ PPP+E+ A
Sbjct: 368 ETPPPDTPHK----KRAAPPPPQEVNA 390
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 25.0 bits (52), Expect = 7.7
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +3
Query: 30 PNATRLDPPAPIIKMTESXXXXXXXXXXXXXXENGATETPQEETPEKSTGEKKDET 197
P+A PP P K+ E E G + P+E K + EKK+++
Sbjct: 47 PSAESPPPPPPAPKVPEPPKAPPPADAVKKIEEKGEEKKPEEPAKSKKS-EKKEKS 101
>Z46267-16|CAO78720.1| 576|Caenorhabditis elegans Hypothetical
protein F49E2.2c protein.
Length = 576
Score = 25.0 bits (52), Expect = 7.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 116 LLRCWSRGGVRTLSHFDDRGGWI 48
LL+C SRG V +R GW+
Sbjct: 547 LLKCGSRGWVFVRDSISNRTGWV 569
>Z46267-4|CAD45594.1| 517|Caenorhabditis elegans Hypothetical
protein F49E2.2b protein.
Length = 517
Score = 25.0 bits (52), Expect = 7.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 116 LLRCWSRGGVRTLSHFDDRGGWI 48
LL+C SRG V +R GW+
Sbjct: 488 LLKCGSRGWVFVRDSISNRTGWV 510
>Z46267-3|CAA86421.3| 522|Caenorhabditis elegans Hypothetical
protein F49E2.2a protein.
Length = 522
Score = 25.0 bits (52), Expect = 7.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 116 LLRCWSRGGVRTLSHFDDRGGWI 48
LL+C SRG V +R GW+
Sbjct: 493 LLKCGSRGWVFVRDSISNRTGWV 515
>L10986-6|AAA28015.1| 262|Caenorhabditis elegans Hypothetical
protein F10E9.4 protein.
Length = 262
Score = 25.0 bits (52), Expect = 7.7
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 156 ETPEKSTGEKKDETPPPKEMRARSTYRFRG-SSNVKILKK 272
E + +T ++ E+ PK+ + + YR R +N+K KK
Sbjct: 8 ENEDGTTEVQETESEAPKDKKEKKEYRLRTLGANIKTSKK 47
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,168,742
Number of Sequences: 27780
Number of extensions: 103374
Number of successful extensions: 518
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 238114316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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