Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0878
         (277 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   1.2  
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    20   6.5  
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    20   6.5  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    19   8.6  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    19   8.6  

>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +3

Query: 150 QEETPEKSTGEKKDETPPPKEMRARSTYRFRGSSNVKIL 266
           Q E  + S  + K  T  P E    S Y+FR  + + IL
Sbjct: 346 QNEYEQPSEEDLKRITNQPSEGEDISDYKFRHITEITIL 384


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 243 PETGKYYGRAFPWAVGSHPFSPR 175
           P+ G+   R FP   G  PF+P+
Sbjct: 27  PQPGR---RPFPTFPGQGPFNPK 46


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 243 PETGKYYGRAFPWAVGSHPFSPR 175
           P+ G+   R FP   G  PF+P+
Sbjct: 13  PQPGR---RPFPTFPGQGPFNPK 32


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 144 TPQEETPEKSTGEKK 188
           TP++  P+ ST +KK
Sbjct: 225 TPRKAPPQLSTTDKK 239


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 5/12 (41%), Positives = 7/12 (58%)
 Frame = -2

Query: 240 ETGKYYGRAFPW 205
           +T  YYG  + W
Sbjct: 4   QTANYYGDVYQW 15


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,712
Number of Sequences: 438
Number of extensions: 1201
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5388717
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)