Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0877
(628 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 8e-38
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 152 2e-37
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 152 2e-37
SB_56| Best HMM Match : Actin (HMM E-Value=0) 152 2e-37
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 152 3e-37
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 150 8e-37
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 133 1e-31
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 49 3e-06
SB_54| Best HMM Match : Actin (HMM E-Value=0) 49 4e-06
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 45 4e-05
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 32 0.44
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 30 1.8
SB_41148| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_47504| Best HMM Match : RVT_1 (HMM E-Value=1.4e-07) 29 4.1
SB_41368| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_8479| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_53037| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 153 bits (372), Expect = 8e-38
Identities = 70/73 (95%), Positives = 73/73 (100%)
Frame = -1
Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
TTMYPG+ADRMQKEI+ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 277 TTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 336
Query: 328 DESGPSIVHRKCF 290
DESGP+IVHRKCF
Sbjct: 337 DESGPAIVHRKCF 349
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = -2
Query: 624 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
P FLGME+ GIHETTYNSIMKCDVDIRKDLYANTV+SGG
Sbjct: 238 PSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVMSGG 276
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 152 bits (369), Expect = 2e-37
Identities = 70/73 (95%), Positives = 72/73 (98%)
Frame = -1
Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
TTMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 266 TTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 325
Query: 328 DESGPSIVHRKCF 290
DESGP+IVHRKCF
Sbjct: 326 DESGPAIVHRKCF 338
Score = 81.4 bits (192), Expect = 5e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = -2
Query: 624 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
P FLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG
Sbjct: 227 PSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 265
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 152 bits (369), Expect = 2e-37
Identities = 70/73 (95%), Positives = 72/73 (98%)
Frame = -1
Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 STMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 328 DESGPSIVHRKCF 290
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
Score = 81.4 bits (192), Expect = 5e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = -2
Query: 624 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
P FLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG
Sbjct: 265 PSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 303
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 152 bits (369), Expect = 2e-37
Identities = 70/73 (95%), Positives = 72/73 (98%)
Frame = -1
Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 303 STMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 328 DESGPSIVHRKCF 290
DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375
Score = 81.4 bits (192), Expect = 5e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = -2
Query: 624 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
P FLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG
Sbjct: 264 PSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 302
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 152 bits (368), Expect = 3e-37
Identities = 70/73 (95%), Positives = 72/73 (98%)
Frame = -1
Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
+TMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 STMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 328 DESGPSIVHRKCF 290
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
Score = 81.4 bits (192), Expect = 5e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = -2
Query: 624 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
P FLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG
Sbjct: 265 PSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 303
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 150 bits (364), Expect = 8e-37
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = -1
Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
+TM+PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 303 STMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 328 DESGPSIVHRKCF 290
DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375
Score = 81.4 bits (192), Expect = 5e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = -2
Query: 624 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
P FLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG
Sbjct: 264 PSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 302
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 133 bits (321), Expect = 1e-31
Identities = 59/73 (80%), Positives = 67/73 (91%)
Frame = -1
Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYSVWIGGSILASLSTFQQMWI+K+EY
Sbjct: 77 STMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLSTFQQMWIAKEEY 136
Query: 328 DESGPSIVHRKCF 290
E GP IVHRKCF
Sbjct: 137 HEYGPPIVHRKCF 149
Score = 71.3 bits (167), Expect = 6e-13
Identities = 32/39 (82%), Positives = 33/39 (84%)
Frame = -2
Query: 624 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
P FLGMEA GIHE YN IMKCDVDIRKDLY+N VLSGG
Sbjct: 38 PAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYSNCVLSGG 76
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = -1
Query: 457 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THR 278
+ P ++ ++I+ ++Y+VW GGS+LAS F + +K +YDE GPSI F HR
Sbjct: 285 IKPKPIETQVISHHMQRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF-LHR 343
Score = 34.7 bits (76), Expect = 0.062
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 594 IHETTYNSIMKCDVDIRKDLYANTVLSGG 508
+ E N I C +D+R+ LY N VLSGG
Sbjct: 223 LSEVVDNVIQNCPIDVRRPLYKNIVLSGG 251
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = -2
Query: 624 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 511
P LG + GIHE+ + SI KCD+D+R +L+ N VLSG
Sbjct: 2309 PSLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Frame = -1
Query: 541 GLVRQHRIVRWTTMYPGIADRMQKEITALAPSTMKIKIIA---PPERKYSVWIGGSILAS 371
GL + T+ G +R+ +E+ + P +M++K+I+ E++++ WIGGSILAS
Sbjct: 170 GLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSSVEKRFNPWIGGSILAS 229
Query: 370 L 368
L
Sbjct: 230 L 230
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 612 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
G A G+ + S+ D+DIR L+ + +++GG
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGG 180
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = -1
Query: 439 KIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDESG 317
KI+I PP RK+ V++GG++LA + W++++EY+E G
Sbjct: 358 KIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -2
Query: 624 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
P + +E G+ E +N+I D+D R + Y + VLSGG
Sbjct: 268 PHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGG 306
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -2
Query: 573 SIMKCDVDIRKDLYANTVLSGG 508
+I K D+D+R+ LY+N VLSGG
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGG 285
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Frame = -1
Query: 520 IVRWTTMYPGIADRMQKEITALAPSTM--------KIKIIAPP-ERKYSVWIGGSILASL 368
++ T M PG R+ +EI L S +K+ PP + W+GG+I SL
Sbjct: 83 LIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQPPVNANITAWLGGAIFGSL 142
Query: 367 STFQQMWISKQEYDE 323
+++ Y +
Sbjct: 143 EVLADRSTTRERYQQ 157
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 363 PSNRCGSRNRSTTSLAPPLYTGSASKRTARRCLQQPGPAAQ 241
P N+ G++ R +L P++TGS + R +P P+A+
Sbjct: 879 PGNQAGNKTRPLRALRSPIHTGSTLEVDRTRQGTRPDPSAR 919
>SB_41148| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 336 RSTTSLAPPLYTGSASKRTARRCLQQPGPAAQFRL 232
++T P++T S K+T R C++ P P + R+
Sbjct: 18 KNTLRFIMPVFTRSGRKKTNRTCIEDPTPQTERRV 52
>SB_47504| Best HMM Match : RVT_1 (HMM E-Value=1.4e-07)
Length = 1002
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -1
Query: 526 HRIVRWTTMYPGIADRMQKEI--TALAPSTMKIKIIAPPERKYSVWI 392
HRIVRW T+ +A + + T L P +I+II P Y V I
Sbjct: 826 HRIVRWVTLALFVALVVLATVFATKLKPDEEQIEIIGPGTNWYDVRI 872
>SB_41368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -3
Query: 428 HCSSREEVLRMDRWIDPRLPLYLPTDVDLETGVRRVWPLHCTQEVLLNAPRVAASSSP 255
HC+ +E L+ W + LP+ + V+R + L Q+VL P +S+SP
Sbjct: 228 HCNFWDEKLKEGDWEPEEIASKLPSFLSFVRDVQRNFSLGDEQDVLERPPPRWSSNSP 285
>SB_8479| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -2
Query: 396 GSVDRSSPPSLPSNRCGSRNRS----TTSLAPPLYTGSASKRTARRC 268
GS+ SP S P +R GSR R+ T+S A + +T ++C
Sbjct: 338 GSIAPPSPTSTPRSRTGSRTRTPPTPTSSRASSRGSARGGAKTTKKC 384
>SB_53037| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 499
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 443 CRWGESCDFLLHTVGDSRVHGGPPDN-TVLAYKSLRMSTSHFMMELYVVSWMPQASIPKK 619
CR+GE C F+ +T+ PD+ T + S+R T ++ W + PKK
Sbjct: 119 CRFGEKCKFVHNTIPVGATSANEPDSETAAPHTSVR--TLRYIPNEEETQW--EEKKPKK 174
Query: 620 R 622
R
Sbjct: 175 R 175
>SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = -2
Query: 366 LPSNRCGSRNRSTTSLAPPLYTGSASKRTARRCLQQP 256
L C SR + P Y G RT ++C +P
Sbjct: 118 LVKRTCNSRKKKKPEKRPSSYNGDTDYRTRKQCRYEP 154
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 387 DRSSPPSLPSNRCGSRNRSTTSLAPPLYTGSASKRTARRCLQQP 256
D +S P RC R S T P YTG+A C QP
Sbjct: 744 DCASNPCAAYQRCIDRIDSYTCACPLGYTGNACDVNIDECASQP 787
>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 408 STPYGSVDRSSPPSLPSNRCGSRNRSTTSLAPPLYTGSAS 289
STP +V PP PSN + ++ S +P T S S
Sbjct: 217 STPQATVQTPPPPPEPSNEPSTSSKPKASPSPSSITTSTS 256
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,330,946
Number of Sequences: 59808
Number of extensions: 481544
Number of successful extensions: 1280
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1277
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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