Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0877
         (628 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         157   3e-40
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         157   3e-40
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         157   3e-40
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          146   4e-37
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   7.9  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   7.9  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  157 bits (381), Expect = 3e-40
 Identities = 73/73 (100%), Positives = 73/73 (100%)
 Frame = -1

Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
           TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363

Query: 328 DESGPSIVHRKCF 290
           DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376



 Score = 86.2 bits (204), Expect = 8e-19
 Identities = 38/39 (97%), Positives = 38/39 (97%)
 Frame = -2

Query: 624 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
           P FLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG
Sbjct: 265 PSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 303


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  157 bits (381), Expect = 3e-40
 Identities = 73/73 (100%), Positives = 73/73 (100%)
 Frame = -1

Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
           TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363

Query: 328 DESGPSIVHRKCF 290
           DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376



 Score = 86.2 bits (204), Expect = 8e-19
 Identities = 38/39 (97%), Positives = 38/39 (97%)
 Frame = -2

Query: 624 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
           P FLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG
Sbjct: 265 PSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 303


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  157 bits (381), Expect = 3e-40
 Identities = 73/73 (100%), Positives = 73/73 (100%)
 Frame = -1

Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
           TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363

Query: 328 DESGPSIVHRKCF 290
           DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376



 Score = 86.2 bits (204), Expect = 8e-19
 Identities = 38/39 (97%), Positives = 38/39 (97%)
 Frame = -2

Query: 624 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
           P FLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG
Sbjct: 265 PSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 303


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  146 bits (355), Expect = 4e-37
 Identities = 67/73 (91%), Positives = 69/73 (94%)
 Frame = -1

Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
           TTMYPGIADRMQKEIT+LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQ MWISK EY
Sbjct: 304 TTMYPGIADRMQKEITSLAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQTMWISKHEY 363

Query: 328 DESGPSIVHRKCF 290
           DE GP IVHRKCF
Sbjct: 364 DEGGPGIVHRKCF 376



 Score = 76.2 bits (179), Expect = 8e-16
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = -2

Query: 624 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
           P FLGME+ GIHET YNSIM+CDVDIRKDLYAN+VLSGG
Sbjct: 265 PSFLGMESTGIHETVYNSIMRCDVDIRKDLYANSVLSGG 303


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 386  IDPRLPLYLPTDVDLETGVRRVW 318
            +DP + LYL T+  L+ G +  W
Sbjct: 1188 LDPDIRLYLKTNTYLQWGDKLFW 1210


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 548 SVRTCTPTPYCPVDHHVPWNRRPY 477
           +VR C PTP   + ++  W  RP+
Sbjct: 230 TVRLCLPTPPNRLTNNGYWQLRPH 253


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,897
Number of Sequences: 2352
Number of extensions: 15810
Number of successful extensions: 42
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)