BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0877 (628 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 157 3e-40 U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 157 3e-40 U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 157 3e-40 CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 146 4e-37 AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 23 7.9 AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 23 7.9 >U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. Length = 376 Score = 157 bits (381), Expect = 3e-40 Identities = 73/73 (100%), Positives = 73/73 (100%) Frame = -1 Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363 Query: 328 DESGPSIVHRKCF 290 DESGPSIVHRKCF Sbjct: 364 DESGPSIVHRKCF 376 Score = 86.2 bits (204), Expect = 8e-19 Identities = 38/39 (97%), Positives = 38/39 (97%) Frame = -2 Query: 624 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508 P FLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG Sbjct: 265 PSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 303 >U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. Length = 376 Score = 157 bits (381), Expect = 3e-40 Identities = 73/73 (100%), Positives = 73/73 (100%) Frame = -1 Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363 Query: 328 DESGPSIVHRKCF 290 DESGPSIVHRKCF Sbjct: 364 DESGPSIVHRKCF 376 Score = 86.2 bits (204), Expect = 8e-19 Identities = 38/39 (97%), Positives = 38/39 (97%) Frame = -2 Query: 624 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508 P FLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG Sbjct: 265 PSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 303 >U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. Length = 376 Score = 157 bits (381), Expect = 3e-40 Identities = 73/73 (100%), Positives = 73/73 (100%) Frame = -1 Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363 Query: 328 DESGPSIVHRKCF 290 DESGPSIVHRKCF Sbjct: 364 DESGPSIVHRKCF 376 Score = 86.2 bits (204), Expect = 8e-19 Identities = 38/39 (97%), Positives = 38/39 (97%) Frame = -2 Query: 624 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508 P FLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG Sbjct: 265 PSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 303 >CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. Length = 376 Score = 146 bits (355), Expect = 4e-37 Identities = 67/73 (91%), Positives = 69/73 (94%) Frame = -1 Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329 TTMYPGIADRMQKEIT+LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQ MWISK EY Sbjct: 304 TTMYPGIADRMQKEITSLAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQTMWISKHEY 363 Query: 328 DESGPSIVHRKCF 290 DE GP IVHRKCF Sbjct: 364 DEGGPGIVHRKCF 376 Score = 76.2 bits (179), Expect = 8e-16 Identities = 33/39 (84%), Positives = 36/39 (92%) Frame = -2 Query: 624 PRFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508 P FLGME+ GIHET YNSIM+CDVDIRKDLYAN+VLSGG Sbjct: 265 PSFLGMESTGIHETVYNSIMRCDVDIRKDLYANSVLSGG 303 >AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. Length = 1356 Score = 23.0 bits (47), Expect = 7.9 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = -3 Query: 386 IDPRLPLYLPTDVDLETGVRRVW 318 +DP + LYL T+ L+ G + W Sbjct: 1188 LDPDIRLYLKTNTYLQWGDKLFW 1210 >AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein protein. Length = 1077 Score = 23.0 bits (47), Expect = 7.9 Identities = 9/24 (37%), Positives = 14/24 (58%) Frame = -3 Query: 548 SVRTCTPTPYCPVDHHVPWNRRPY 477 +VR C PTP + ++ W RP+ Sbjct: 230 TVRLCLPTPPNRLTNNGYWQLRPH 253 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 711,897 Number of Sequences: 2352 Number of extensions: 15810 Number of successful extensions: 42 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 42 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 61050630 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -