Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0876
         (568 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    23   2.8  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    23   2.8  
AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            22   4.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   6.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   6.5  

>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 92  EDLYTSTYNQNLRAELIKSSRLVKALRDCF 3
           E+LY+  Y+     E++ + RL     DCF
Sbjct: 20  EELYSDKYDYVNIDEILANDRLRNQYYDCF 49


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 92  EDLYTSTYNQNLRAELIKSSRLVKALRDCF 3
           E+LY+  Y+     E++ + RL     DCF
Sbjct: 20  EELYSDKYDYVNIDEILANDRLRNQYYDCF 49


>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +1

Query: 172 PDVKWLLEPIDIYKNK 219
           P++ WL + I++Y +K
Sbjct: 52  PEITWLKDGIELYHHK 67


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 464  RPSGYDCNKEIESLSSSVFLFNY 396
            RP+G   N E  +LSSS  L  +
Sbjct: 1005 RPAGPPINLEARALSSSEILITW 1027


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 464  RPSGYDCNKEIESLSSSVFLFNY 396
            RP+G   N E  +LSSS  L  +
Sbjct: 1001 RPAGPPINLEARALSSSEILITW 1023


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,467
Number of Sequences: 438
Number of extensions: 3362
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)