BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0876 (568 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 23 2.8 AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 23 2.8 AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 22 4.9 AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 6.5 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 6.5 >DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1 protein. Length = 116 Score = 22.6 bits (46), Expect = 2.8 Identities = 10/30 (33%), Positives = 16/30 (53%) Frame = -3 Query: 92 EDLYTSTYNQNLRAELIKSSRLVKALRDCF 3 E+LY+ Y+ E++ + RL DCF Sbjct: 20 EELYSDKYDYVNIDEILANDRLRNQYYDCF 49 >AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein protein. Length = 116 Score = 22.6 bits (46), Expect = 2.8 Identities = 10/30 (33%), Positives = 16/30 (53%) Frame = -3 Query: 92 EDLYTSTYNQNLRAELIKSSRLVKALRDCF 3 E+LY+ Y+ E++ + RL DCF Sbjct: 20 EELYSDKYDYVNIDEILANDRLRNQYYDCF 49 >AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. Length = 122 Score = 21.8 bits (44), Expect = 4.9 Identities = 6/16 (37%), Positives = 12/16 (75%) Frame = +1 Query: 172 PDVKWLLEPIDIYKNK 219 P++ WL + I++Y +K Sbjct: 52 PEITWLKDGIELYHHK 67 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 21.4 bits (43), Expect = 6.5 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = -3 Query: 464 RPSGYDCNKEIESLSSSVFLFNY 396 RP+G N E +LSSS L + Sbjct: 1005 RPAGPPINLEARALSSSEILITW 1027 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 21.4 bits (43), Expect = 6.5 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = -3 Query: 464 RPSGYDCNKEIESLSSSVFLFNY 396 RP+G N E +LSSS L + Sbjct: 1001 RPAGPPINLEARALSSSEILITW 1023 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 162,467 Number of Sequences: 438 Number of extensions: 3362 Number of successful extensions: 7 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 16440594 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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