BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0875 (327 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z46933-6|CAA87038.3| 321|Caenorhabditis elegans Hypothetical pr... 26 7.4 Z46829-2|CAA86863.3| 321|Caenorhabditis elegans Hypothetical pr... 26 7.4 L23646-7|AAA28038.3| 471|Caenorhabditis elegans Hypothetical pr... 25 9.7 L23646-6|AAU87821.1| 469|Caenorhabditis elegans Hypothetical pr... 25 9.7 >Z46933-6|CAA87038.3| 321|Caenorhabditis elegans Hypothetical protein T14B1.2 protein. Length = 321 Score = 25.8 bits (54), Expect = 7.4 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = -3 Query: 283 YKSLFIILYYIVRYITSFNLATLV*C 206 Y L ++Y+V +TSF+L+ L+ C Sbjct: 169 YVYLLSPIFYVVMILTSFSLSALIYC 194 >Z46829-2|CAA86863.3| 321|Caenorhabditis elegans Hypothetical protein T14B1.2 protein. Length = 321 Score = 25.8 bits (54), Expect = 7.4 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = -3 Query: 283 YKSLFIILYYIVRYITSFNLATLV*C 206 Y L ++Y+V +TSF+L+ L+ C Sbjct: 169 YVYLLSPIFYVVMILTSFSLSALIYC 194 >L23646-7|AAA28038.3| 471|Caenorhabditis elegans Hypothetical protein F44E2.7a protein. Length = 471 Score = 25.4 bits (53), Expect = 9.7 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -1 Query: 303 VRVRPNSTNHYLLFY 259 VRV P++ NHYL +Y Sbjct: 16 VRVDPSTLNHYLCYY 30 >L23646-6|AAU87821.1| 469|Caenorhabditis elegans Hypothetical protein F44E2.7d protein. Length = 469 Score = 25.4 bits (53), Expect = 9.7 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -1 Query: 303 VRVRPNSTNHYLLFY 259 VRV P++ NHYL +Y Sbjct: 16 VRVDPSTLNHYLCYY 30 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 4,693,986 Number of Sequences: 27780 Number of extensions: 59184 Number of successful extensions: 112 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 112 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 112 length of database: 12,740,198 effective HSP length: 71 effective length of database: 10,767,818 effective search space used: 398409266 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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