Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0874
         (463 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012441-1|AAS93712.1| 1423|Drosophila melanogaster RH07858p pro...    29   2.3  
AE014296-669|AAF47779.2|  942|Drosophila melanogaster CG14973-PA...    29   3.0  
AY075252-1|AAL68119.1|  305|Drosophila melanogaster AT21693p pro...    29   4.0  
AE013599-639|AAM68844.1|  289|Drosophila melanogaster CG2127-PB,...    29   4.0  
AE013599-638|AAF59102.2|  305|Drosophila melanogaster CG2127-PA,...    29   4.0  
AY094729-1|AAM11082.1|  723|Drosophila melanogaster GH24458p pro...    28   5.3  
AE013599-3832|AAF47176.3| 1423|Drosophila melanogaster CG3328-PA...    28   5.3  

>BT012441-1|AAS93712.1| 1423|Drosophila melanogaster RH07858p protein.
          Length = 1423

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 330  PAERLPTKPHRAPPLRLHETHGTAQCAPKARPYP 431
            P   +P  P R PP  L++T  + +  P+A P P
Sbjct: 933  PVHVVPAAPARVPPAALNDTVASTEKPPQAIPLP 966


>AE014296-669|AAF47779.2|  942|Drosophila melanogaster CG14973-PA
           protein.
          Length = 942

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 277 PQFLTGDYPLKKAREALAPQNDYRLNPIEPHHSDSTKP 390
           PQ LT  YP K   ++L+P+ D   N +  + S +  P
Sbjct: 735 PQQLTNGYPEKSTEDSLSPKTDITSNSLPENPSATIVP 772


>AY075252-1|AAL68119.1|  305|Drosophila melanogaster AT21693p
           protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
 Frame = +3

Query: 321 STCPAERLPT-KPHRAPPLRLHETHGTAQCAPKARPYP 431
           S CP   LP  KP R PP   H       C  +  PYP
Sbjct: 219 SPCPRWTLPCCKPARIPP-SCHRERRPTDCTKRPAPYP 255


>AE013599-639|AAM68844.1|  289|Drosophila melanogaster CG2127-PB,
           isoform B protein.
          Length = 289

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
 Frame = +3

Query: 321 STCPAERLPT-KPHRAPPLRLHETHGTAQCAPKARPYP 431
           S CP   LP  KP R PP   H       C  +  PYP
Sbjct: 203 SPCPRWTLPCCKPARIPP-SCHRERRPTDCTKRPAPYP 239


>AE013599-638|AAF59102.2|  305|Drosophila melanogaster CG2127-PA,
           isoform A protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
 Frame = +3

Query: 321 STCPAERLPT-KPHRAPPLRLHETHGTAQCAPKARPYP 431
           S CP   LP  KP R PP   H       C  +  PYP
Sbjct: 219 SPCPRWTLPCCKPARIPP-SCHRERRPTDCTKRPAPYP 255


>AY094729-1|AAM11082.1|  723|Drosophila melanogaster GH24458p
           protein.
          Length = 723

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 330 PAERLPTKPHRAPPLRLHETHGTAQCAPKARPYP 431
           P   +P  P + PP  L++T  + +  P+A P P
Sbjct: 233 PVHVVPAAPAKVPPAALNDTVASTEKPPQAIPLP 266


>AE013599-3832|AAF47176.3| 1423|Drosophila melanogaster CG3328-PA
            protein.
          Length = 1423

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 330  PAERLPTKPHRAPPLRLHETHGTAQCAPKARPYP 431
            P   +P  P + PP  L++T  + +  P+A P P
Sbjct: 933  PVHVVPAAPAKVPPAALNDTVASTEKPPQAIPLP 966


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,068,729
Number of Sequences: 53049
Number of extensions: 331428
Number of successful extensions: 1038
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1539014778
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)