BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0873 (470 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC10F6.11c |||kinase activator |Schizosaccharomyces pombe|chr ... 27 1.4 SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces p... 25 4.4 SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 25 5.8 SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 25 5.8 SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 25 7.7 SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces... 25 7.7 SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 25 7.7 SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomy... 25 7.7 >SPAC10F6.11c |||kinase activator |Schizosaccharomyces pombe|chr 1|||Manual Length = 481 Score = 27.1 bits (57), Expect = 1.4 Identities = 10/25 (40%), Positives = 17/25 (68%) Frame = +3 Query: 243 RILSKTSNYTKYDQLGILFDKLEST 317 ++L NY ++QL +L D+LES+ Sbjct: 139 QLLDLVQNYPTFNQLNVLHDRLESS 163 >SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 417 Score = 25.4 bits (53), Expect = 4.4 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = -2 Query: 466 SSPCIFANGILNAGRSGCS 410 S C+F NG G SGC+ Sbjct: 386 SGTCVFENGAFQNGGSGCT 404 >SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces pombe|chr 3|||Manual Length = 2812 Score = 25.0 bits (52), Expect = 5.8 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = +3 Query: 54 YDM*NNHNIAYESFTKIVQMQYSDL*FRKPRSYDKD 161 Y +NH I +S +++M S + SYDKD Sbjct: 674 YPFNSNHTIDCDSLQNVIKMLESSIDEISSASYDKD 709 >SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 1310 Score = 25.0 bits (52), Expect = 5.8 Identities = 12/30 (40%), Positives = 14/30 (46%) Frame = +3 Query: 138 KPRSYDKDVSLDSHVDTAVFSNNRQSTSFS 227 K R DKD L H D S+ ST F+ Sbjct: 526 KKRPSDKDNKLHIHYDDGAMSSTSYSTDFT 555 >SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schizosaccharomyces pombe|chr 1|||Manual Length = 190 Score = 24.6 bits (51), Expect = 7.7 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +3 Query: 45 FRFYDM*NNHNIAYESFTKIVQMQY 119 F+ YD+ NN I+Y+ +IV Y Sbjct: 105 FQLYDLDNNGLISYDEMLRIVDAIY 129 >SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces pombe|chr 2|||Manual Length = 476 Score = 24.6 bits (51), Expect = 7.7 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%) Frame = +3 Query: 135 RKPRSYDKDVSLDSHVDTAV--FSNNRQSTSFSSHK*G 242 R+PR Y SH D A F +R S S+SS G Sbjct: 152 RRPRFYSSYSYPSSHQDPAYSSFKRHRSSNSYSSSSNG 189 >SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr 1|||Manual Length = 624 Score = 24.6 bits (51), Expect = 7.7 Identities = 16/50 (32%), Positives = 23/50 (46%) Frame = +3 Query: 183 DTAVFSNNRQSTSFSSHK*GRILSKTSNYTKYDQLGILFDKLESTYPDLA 332 D A F +T F++ TSN T YD + +F+KL D+A Sbjct: 311 DNAGFVMGTSATLFNTFLLEWSQEVTSNSTLYDIIHKVFEKLSEDQNDIA 360 >SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomyces pombe|chr 1|||Manual Length = 802 Score = 24.6 bits (51), Expect = 7.7 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -2 Query: 427 GRSGCSFCTSCVICSTSNFPTF 362 G S F SC++C T+ PTF Sbjct: 257 GLSWQQFIDSCLLCGTAISPTF 278 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,036,343 Number of Sequences: 5004 Number of extensions: 42338 Number of successful extensions: 117 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 115 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 117 length of database: 2,362,478 effective HSP length: 67 effective length of database: 2,027,210 effective search space used: 180421690 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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