BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0873 (470 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical pr... 28 2.9 Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical p... 28 2.9 D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein. 28 2.9 Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical p... 27 5.1 Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical p... 27 5.1 Z81540-9|CAD89742.1| 740|Caenorhabditis elegans Hypothetical pr... 27 6.8 Z50742-5|CAA90618.2| 650|Caenorhabditis elegans Hypothetical pr... 27 9.0 >Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical protein T04A8.14 protein. Length = 1521 Score = 28.3 bits (60), Expect = 2.9 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Frame = +3 Query: 66 NNHNIAYESFTKIV-QMQYSDL*FRKPRSYDKDVSLDSHVDTAVFSN 203 N HN++YE+ TK++ +M +S+ R + D +S+ + V+ N Sbjct: 1302 NFHNVSYEAATKMLDEMDWSECIIRPSANKDSGLSVTWKICDRVYHN 1348 >Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical protein T04A8.14 protein. Length = 1521 Score = 28.3 bits (60), Expect = 2.9 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Frame = +3 Query: 66 NNHNIAYESFTKIV-QMQYSDL*FRKPRSYDKDVSLDSHVDTAVFSN 203 N HN++YE+ TK++ +M +S+ R + D +S+ + V+ N Sbjct: 1302 NFHNVSYEAATKMLDEMDWSECIIRPSANKDSGLSVTWKICDRVYHN 1348 >D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein. Length = 1521 Score = 28.3 bits (60), Expect = 2.9 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Frame = +3 Query: 66 NNHNIAYESFTKIV-QMQYSDL*FRKPRSYDKDVSLDSHVDTAVFSN 203 N HN++YE+ TK++ +M +S+ R + D +S+ + V+ N Sbjct: 1302 NFHNVSYEAATKMLDEMDWSECIIRPSANKDSGLSVTWKICDRVYHN 1348 >Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical protein K07F5.13c protein. Length = 639 Score = 27.5 bits (58), Expect = 5.1 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = -3 Query: 432 TLDVPGVHSARPALFVVPATFLPSTGIPQSNILSP 328 TL + P F P+ LP T PQS+ LSP Sbjct: 140 TLGAGSLSGNTPTSFATPSA-LPGTNAPQSSFLSP 173 >Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical protein K07F5.13a protein. Length = 612 Score = 27.5 bits (58), Expect = 5.1 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = -3 Query: 432 TLDVPGVHSARPALFVVPATFLPSTGIPQSNILSP 328 TL + P F P+ LP T PQS+ LSP Sbjct: 113 TLGAGSLSGNTPTSFATPSA-LPGTNAPQSSFLSP 146 >Z81540-9|CAD89742.1| 740|Caenorhabditis elegans Hypothetical protein F46B3.17 protein. Length = 740 Score = 27.1 bits (57), Expect = 6.8 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -3 Query: 417 GVHSARPALFVVPATFLPSTGIPQS 343 G +RPALF P LPS +P++ Sbjct: 554 GTGHSRPALFAPPRAQLPSQSVPKA 578 >Z50742-5|CAA90618.2| 650|Caenorhabditis elegans Hypothetical protein K09A11.5 protein. Length = 650 Score = 26.6 bits (56), Expect = 9.0 Identities = 11/15 (73%), Positives = 11/15 (73%) Frame = -3 Query: 366 PSTGIPQSNILSPDP 322 PS G PQSN LS DP Sbjct: 374 PSEGTPQSNFLSNDP 388 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,154,516 Number of Sequences: 27780 Number of extensions: 237176 Number of successful extensions: 589 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 557 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 589 length of database: 12,740,198 effective HSP length: 76 effective length of database: 10,628,918 effective search space used: 850313440 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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