Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0872
(603 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 164 4e-41
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 164 4e-41
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 164 5e-41
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 163 7e-41
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 162 2e-40
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 159 2e-39
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 158 4e-39
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 156 1e-38
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 146 9e-36
12_02_1282 + 27528159-27529148,27529549-27529614 87 1e-17
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 77 1e-14
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 71 9e-13
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 67 9e-12
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 62 3e-10
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 56 2e-08
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 54 7e-08
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 50 2e-06
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 46 3e-05
01_05_0018 - 17208358-17208367,17208485-17208537,17209321-172093... 33 0.17
11_03_0057 + 9375083-9375088,9375904-9376031,9376107-9376166,937... 29 2.8
08_02_0238 + 14665813-14668798,14669088-14669125 29 2.8
12_01_0744 - 6688631-6688660,6689032-6690603,6690697-6691497 28 6.5
07_01_0639 - 4785446-4786186,4786429-4786656,4786727-4786872,478... 28 6.5
05_01_0311 + 2452230-2452232,2452401-2452809,2454136-2454263,245... 28 6.5
03_05_1049 - 29956379-29956400,29957103-29957188,29957269-299574... 28 6.5
12_01_0748 - 6728221-6728305,6728788-6728842,6729202-6729289,672... 27 8.7
09_02_0456 - 9525067-9525422,9525679-9528226 27 8.7
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 164 bits (399), Expect = 4e-41
Identities = 75/83 (90%), Positives = 79/83 (95%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 292 LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 351
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
QQMWISK EYDESGPSIVHRKCF
Sbjct: 352 QQMWISKGEYDESGPSIVHRKCF 374
Score = 64.5 bits (150), Expect = 6e-11
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQPS +GMEA GIHETTYNSIMKCDVDIRKD
Sbjct: 261 FQPSLIGMEAPGIHETTYNSIMKCDVDIRKD 291
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 164 bits (399), Expect = 4e-41
Identities = 74/83 (89%), Positives = 79/83 (95%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNVVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
QQMWISK EYDESGP+IVHRKCF
Sbjct: 355 QQMWISKDEYDESGPAIVHRKCF 377
Score = 64.5 bits (150), Expect = 6e-11
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQPS +GME+ GIHETTYNSIMKCDVDIRKD
Sbjct: 264 FQPSMIGMESAGIHETTYNSIMKCDVDIRKD 294
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 164 bits (398), Expect = 5e-41
Identities = 74/83 (89%), Positives = 79/83 (95%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
QQMWISK EYDESGP+IVHRKCF
Sbjct: 355 QQMWISKDEYDESGPAIVHRKCF 377
Score = 65.7 bits (153), Expect = 3e-11
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQPS +GMEA GIHETTYNSIMKCDVDIRKD
Sbjct: 264 FQPSMIGMEAAGIHETTYNSIMKCDVDIRKD 294
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 163 bits (397), Expect = 7e-41
Identities = 74/83 (89%), Positives = 79/83 (95%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
QQMWI+K EYDESGPSIVHRKCF
Sbjct: 355 QQMWIAKAEYDESGPSIVHRKCF 377
Score = 68.1 bits (159), Expect = 5e-12
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQPSF+GMEA GIHETTYNSIMKCDVDIRKD
Sbjct: 264 FQPSFIGMEAAGIHETTYNSIMKCDVDIRKD 294
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 162 bits (394), Expect = 2e-40
Identities = 73/83 (87%), Positives = 79/83 (95%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 298 LYGNVVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 357
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
QQMWISK EYDESGP+IVHRKCF
Sbjct: 358 QQMWISKAEYDESGPAIVHRKCF 380
Score = 65.3 bits (152), Expect = 4e-11
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQPS +GMEA GIHETTYNSIMKCDVDIRKD
Sbjct: 267 FQPSLVGMEAAGIHETTYNSIMKCDVDIRKD 297
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 159 bits (386), Expect = 2e-39
Identities = 71/83 (85%), Positives = 79/83 (95%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
QQMWIS+ EY+ESGP+IVHRKCF
Sbjct: 355 QQMWISRAEYEESGPAIVHRKCF 377
Score = 64.5 bits (150), Expect = 6e-11
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQPS +GMEA GIHETTYNSIMKCDVDIRKD
Sbjct: 264 FQPSLIGMEAPGIHETTYNSIMKCDVDIRKD 294
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 158 bits (383), Expect = 4e-39
Identities = 71/83 (85%), Positives = 77/83 (92%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LY N VLSGG+TM+PGIADRM KEIT+LAPS+MK+K+IAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYGNVVLSGGSTMFPGIADRMSKEITSLAPSSMKVKVIAPPERKYSVWIGGSILASLSTF 353
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
QQMWISK EYDESGP IVH KCF
Sbjct: 354 QQMWISKGEYDESGPGIVHMKCF 376
Score = 60.9 bits (141), Expect = 8e-10
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQPS +GME+ GIHE TYNSIMKCDVDIRKD
Sbjct: 263 FQPSLVGMESPGIHEATYNSIMKCDVDIRKD 293
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 156 bits (379), Expect = 1e-38
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LY N VLSGG+TM+PGI DRM KEITALAP +MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 294 LYGNVVLSGGSTMFPGIGDRMSKEITALAPGSMKIKVVAPPERKYSVWIGGSILASLSTF 353
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
QQMWISK EYDESGP IVH KCF
Sbjct: 354 QQMWISKAEYDESGPGIVHMKCF 376
Score = 64.9 bits (151), Expect = 5e-11
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQPSF+GMEA GIHE TYNSIMKCDVDIRKD
Sbjct: 263 FQPSFIGMEAPGIHEATYNSIMKCDVDIRKD 293
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 146 bits (355), Expect = 9e-36
Identities = 73/97 (75%), Positives = 79/97 (81%), Gaps = 14/97 (14%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 329 Q--------------QMWISKQEYDESGPSIVHRKCF 261
Q QMWISK EYDESGP+IVHRKCF
Sbjct: 355 QQVNLTPTLYEVARMQMWISKGEYDESGPAIVHRKCF 391
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQPSF+GMEA GIHETTYNSIMKCDVDIRKD
Sbjct: 264 FQPSFIGMEAPGIHETTYNSIMKCDVDIRKD 294
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 87.0 bits (206), Expect = 1e-17
Identities = 50/83 (60%), Positives = 53/83 (63%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LY N VLSGGTTM+PGIADRM KEITALAPS+MKIK
Sbjct: 295 LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIK------------------------ 330
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
MWI+K EYDESGPSIVHRKCF
Sbjct: 331 --MWIAKAEYDESGPSIVHRKCF 351
Score = 67.7 bits (158), Expect = 7e-12
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQPSF+GMEA GIHETTYNSIMKCDVDIRKD
Sbjct: 264 FQPSFVGMEAAGIHETTYNSIMKCDVDIRKD 294
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 77.0 bits (181), Expect = 1e-14
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE------RKYSVWIGGSIL 348
L NT+L GGT G DR Q+E L+ S + ++ PPE +YS W+GG+IL
Sbjct: 311 LLENTMLCGGTASMTGFEDRFQREAN-LSASAICPSLVKPPEYMPENLARYSAWLGGAIL 369
Query: 347 ASLSTFQQMWISKQEYDESGPSIVHRKCF 261
A + Q ++K +YDE+GPSIVH+KCF
Sbjct: 370 AKVVFPQNQHVTKGDYDETGPSIVHKKCF 398
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 70.5 bits (165), Expect = 9e-13
Identities = 31/83 (37%), Positives = 49/83 (59%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
L+ +L+GG+T++P +R++KE+ L P ++KIIA + W GGS+LA F
Sbjct: 346 LFERIILTGGSTLFPRFTERLEKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDF 405
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
+ M I+K EY+E G R+ F
Sbjct: 406 ESMCITKSEYEEMGSMRCRRRFF 428
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 67.3 bits (157), Expect = 9e-12
Identities = 31/72 (43%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASL 339
L ++ +LSGG++ + +R++KE+ + ++K++A ER++SVWIGGSILASL
Sbjct: 398 LLSSILLSGGSSSILQLKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGSILASL 457
Query: 338 STFQQMWISKQE 303
+FQQMW SK +
Sbjct: 458 GSFQQMWFSKAD 469
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = -2
Query: 506 YANTVLSGGTTMYPGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLST 333
Y VLSGG++ PG+++R++KE+ L P+ + I++I PP S W G +++++ST
Sbjct: 398 YKTVVLSGGSSCLPGLSERLEKELRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVST 457
Query: 332 FQQMW-ISKQEYDE----SGPSIVH 273
F + W I K+++ + +GPS V+
Sbjct: 458 FTEAWCIKKKQFRQKTRRNGPSFVN 482
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 16/93 (17%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTM----------------KIKIIAPPERK 378
LY N VLSGG+TM+ R+Q+++ + + + ++ +++ P ++
Sbjct: 370 LYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARLGGDAKAQPIEVNVVSHPIQR 429
Query: 377 YSVWIGGSILASLSTFQQMWISKQEYDESGPSI 279
Y+VW GGS+LAS + F + +K EY+E G SI
Sbjct: 430 YAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 462
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 54.4 bits (125), Expect = 7e-08
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAP--------------STMKIKIIAPPERKYS 372
LY N VLSGG+TM+ R+Q +I + +++ ++A P + Y+
Sbjct: 339 LYKNIVLSGGSTMFKDFHKRLQNDIKKIVDERVAATNARHHVEVKPVEVNVVAHPIQSYA 398
Query: 371 VWIGGSILASLSTFQQMWISKQEYDESGPSI 279
W GGS+ AS F + +K+EY+E G SI
Sbjct: 399 AWFGGSVAASNPEFYESCHTKEEYEEHGASI 429
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 11/68 (16%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPPERKYSVWI 363
LY + VLSGG+TMYPG+ R++KE+ L + ++++I PP RK+ V++
Sbjct: 323 LYQHIVLSGGSTMYPGLPSRLEKEMLDRYLDVVLKGNKDGLKKLRLRIEDPPRRKHMVYL 382
Query: 362 GGSILASL 339
GG++LA +
Sbjct: 383 GGAVLAGI 390
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/81 (25%), Positives = 40/81 (49%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
L + +++GG ++ PG+ R++ I P +K++ + W G + A+ S F
Sbjct: 622 LCQSILVTGGCSLIPGMIPRLESGIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKF 681
Query: 329 QQMWISKQEYDESGPSIVHRK 267
+ S +Y E G ++ HRK
Sbjct: 682 GRHTFSLADYREHGENLFHRK 702
>01_05_0018 -
17208358-17208367,17208485-17208537,17209321-17209383,
17209971-17210045,17210090-17210104,17210983-17211045,
17211129-17211218,17211396-17211714,17211814-17211860,
17211949-17212054,17212539-17212592,17212806-17212912,
17212996-17213160,17213383-17213476,17213572-17213636,
17213841-17213969
Length = 484
Score = 33.1 bits (72), Expect = 0.17
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = -2
Query: 587 LGYGSLRHPRDHI*LHHEVRRGHP*GLYANTV--LSGGTTMYPGIADRMQKEITALAPST 414
+GYG+L +P++ H V P GL+ ++G YP A+ + ++++L PS
Sbjct: 204 VGYGNLPYPKEETLSRHSVLG--PNGLHGKWTAPVTGIRIQYPSNAELTKSDVSSLVPSI 261
Query: 413 MKIKIIAPPER 381
+ ++ P R
Sbjct: 262 LNQDLLYGPSR 272
>11_03_0057 +
9375083-9375088,9375904-9376031,9376107-9376166,
9376832-9376892,9377434-9377583,9377667-9377822,
9377905-9378116,9378572-9378673,9378785-9378924,
9379781-9379932
Length = 388
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = -2
Query: 545 LHHEVRRGHP*GL--YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYS 372
++ ++ HP L Y S G MYP D +K+ L K APPER+++
Sbjct: 230 IYRDILEYHPNMLREYLEGTESAGF-MYPSAVDHFKKQFAYLEEHYAKGSTAAPPERQHN 288
Query: 371 VWIGGSILAS 342
S+L S
Sbjct: 289 SLPRPSVLYS 298
>08_02_0238 + 14665813-14668798,14669088-14669125
Length = 1007
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 357 STDPYGVLPLWRSNDLNLHCRW-GESC 434
S DP G L W+ ND CRW G +C
Sbjct: 62 SNDPGGFLGSWKQNDSIGFCRWPGVTC 88
>12_01_0744 - 6688631-6688660,6689032-6690603,6690697-6691497
Length = 800
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -1
Query: 522 TSVRTVRQHRIVRWYHHVPWNRRPYAKGNHSSRPIDNED*DHCSSREEVL--RMDRWIDP 349
+S TVR + W +PWN+ AK SSRP+ D C V+ + W P
Sbjct: 344 SSEYTVRSPPVPPWRAVIPWNK---AKMTSSSRPLPWPDPQLCQGNGGVVVKLLQPWSSP 400
>07_01_0639 -
4785446-4786186,4786429-4786656,4786727-4786872,
4786986-4787186,4787256-4787432,4787741-4788359
Length = 703
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -1
Query: 603 SSNPRSWVWKLAASTRPHITPS*SATWTSVRTVRQHRIVR 484
SS W AS+ P+ P S+ W S+ QH+ +R
Sbjct: 177 SSRSSRGCWSTTASSFPNSRPMPSSAWPSMNLDNQHQSLR 216
>05_01_0311 +
2452230-2452232,2452401-2452809,2454136-2454263,
2455287-2455436,2455526-2455681,2455775-2455986,
2456306-2456407,2456517-2456653,2456769-2457055
Length = 527
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 473 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYS 372
MYP D +K+ L K APPER+++
Sbjct: 350 MYPSAVDHFKKQFAYLEEHYAKGSTAAPPERQHN 383
>03_05_1049 -
29956379-29956400,29957103-29957188,29957269-29957413,
29958518-29958813,29959242-29959253
Length = 186
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 373 PYGSVDRSSPPSLPSNKCGS 314
P+ V SSPP+LP KCG+
Sbjct: 72 PFVGVPPSSPPALPPIKCGA 91
>12_01_0748 -
6728221-6728305,6728788-6728842,6729202-6729289,
6729681-6729818,6729978-6730142,6730235-6730354,
6730555-6730631,6730738-6731113,6731523-6732617
Length = 732
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 324 LLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWG 425
+L+ E S P +LPL NDL+ RWG
Sbjct: 402 VLDAIEKQNYESPPPVSILPLGTGNDLSRVMRWG 435
>09_02_0456 - 9525067-9525422,9525679-9528226
Length = 967
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 360 TDPYGVLPLWRSNDLNLHCRWGE-SCD 437
TDP L WR +DL CRW +CD
Sbjct: 46 TDPTAALSAWRGDDL---CRWPHVACD 69
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,196,696
Number of Sequences: 37544
Number of extensions: 370812
Number of successful extensions: 1066
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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