Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0872
(603 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 177 5e-45
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 177 5e-45
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 177 5e-45
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 177 5e-45
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 177 5e-45
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 177 5e-45
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 177 5e-45
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 177 5e-45
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 177 5e-45
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 171 3e-43
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 169 1e-42
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 99 3e-21
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 97 1e-20
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 65 4e-11
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 40 0.002
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 40 0.002
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.12
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.48
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.48
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.48
AC006670-2|ABC71822.1| 901|Caenorhabditis elegans Patched relat... 31 0.84
Z77136-3|CAB00886.1| 252|Caenorhabditis elegans Hypothetical pr... 28 4.5
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 177 bits (431), Expect = 5e-45
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
Score = 65.7 bits (153), Expect = 2e-11
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQPSFLGME+ GIHET+YNSIMKCD+DIRKD
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKD 293
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 177 bits (431), Expect = 5e-45
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
Score = 65.7 bits (153), Expect = 2e-11
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQPSFLGME+ GIHET+YNSIMKCD+DIRKD
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKD 293
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 177 bits (431), Expect = 5e-45
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
Score = 65.7 bits (153), Expect = 2e-11
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQPSFLGME+ GIHET+YNSIMKCD+DIRKD
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKD 293
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 177 bits (431), Expect = 5e-45
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
Score = 65.7 bits (153), Expect = 2e-11
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQPSFLGME+ GIHET+YNSIMKCD+DIRKD
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKD 293
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 177 bits (431), Expect = 5e-45
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
Score = 65.7 bits (153), Expect = 2e-11
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQPSFLGME+ GIHET+YNSIMKCD+DIRKD
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKD 293
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 177 bits (431), Expect = 5e-45
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
Score = 65.7 bits (153), Expect = 2e-11
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQPSFLGME+ GIHET+YNSIMKCD+DIRKD
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKD 293
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 177 bits (431), Expect = 5e-45
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 250 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 309
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 310 QQMWISKQEYDESGPSIVHRKCF 332
Score = 65.7 bits (153), Expect = 2e-11
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQPSFLGME+ GIHET+YNSIMKCD+DIRKD
Sbjct: 219 FQPSFLGMESAGIHETSYNSIMKCDIDIRKD 249
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 177 bits (431), Expect = 5e-45
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 280 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 339
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 340 QQMWISKQEYDESGPSIVHRKCF 362
Score = 65.7 bits (153), Expect = 2e-11
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQPSFLGME+ GIHET+YNSIMKCD+DIRKD
Sbjct: 249 FQPSFLGMESAGIHETSYNSIMKCDIDIRKD 279
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 177 bits (431), Expect = 5e-45
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
Score = 65.7 bits (153), Expect = 2e-11
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQPSFLGME+ GIHET+YNSIMKCD+DIRKD
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKD 293
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 171 bits (416), Expect = 3e-43
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTF 352
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 QQMWISKQEYDESGPSIVHRKCF 375
Score = 65.7 bits (153), Expect = 2e-11
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQPSFLGME+ GIHET+YNSIMKCD+DIRKD
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKD 293
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 169 bits (411), Expect = 1e-42
Identities = 79/83 (95%), Positives = 81/83 (97%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LYANTVLSGGT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 293 LYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 352
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 QQMWISKQEYDESGPSIVHRKCF 375
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQP+F+GME GIHETTY SIMKCDVDIRKD
Sbjct: 262 FQPAFIGMEGAGIHETTYQSIMKCDVDIRKD 292
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 98.7 bits (235), Expect = 3e-21
Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 3/85 (3%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASL 339
L++N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL
Sbjct: 351 LFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSL 410
Query: 338 STFQQMWISKQEYDESGPSIVHRKC 264
TFQQMW+SK EYDESG SIV +KC
Sbjct: 411 GTFQQMWVSKAEYDESGKSIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 96.7 bits (230), Expect = 1e-20
Identities = 42/83 (50%), Positives = 60/83 (72%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LY+N VLSGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF
Sbjct: 292 LYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTF 351
Query: 329 QQMWISKQEYDESGPSIVHRKCF 261
++MW+ K+EY++ G S +H++ F
Sbjct: 352 RKMWLGKKEYEDMGASAMHKRFF 374
Score = 33.9 bits (74), Expect = 0.090
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRK 512
F+P +G E G+ SIMKCDVD+R+
Sbjct: 261 FKPDLIGTEWPGMAHVVNQSIMKCDVDLRQ 290
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 72.9 bits (171), Expect = 2e-13
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Frame = -2
Query: 506 YANTVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIG 360
Y + VLSGGTTMYPG+ R++KE+ L A KI+I APP RK+ V++G
Sbjct: 298 YKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLG 357
Query: 359 GSILASL--STFQQMWISKQEYDESG 288
G++LA+L Q W+SK+EY+E G
Sbjct: 358 GAVLANLMKDRDQDFWVSKKEYEEGG 383
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 509
FQP + +E G+ E + I D+D R D
Sbjct: 266 FQPHLINVEKAGLSELLFGCIQASDIDTRLD 296
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 64.9 bits (151), Expect = 4e-11
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 16/94 (17%)
Frame = -2
Query: 512 GLYANTVLSGGTTMYPGIADRMQKEITALA----------------PSTMKIKIIAPPER 381
GLY N VLSGG+TM+ A ++Q+++ L+ P + +++I+ +
Sbjct: 321 GLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQ 380
Query: 380 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 279
+Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 381 RYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/69 (36%), Positives = 46/69 (66%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 330
LY N L+GG ++ PGIA+++++E++ + P+T+ ++ P R + ++G I+AS STF
Sbjct: 471 LYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTF 530
Query: 329 QQMWISKQE 303
+ IS Q+
Sbjct: 531 EDSCISLQQ 539
Score = 29.9 bits (64), Expect = 1.5
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = -3
Query: 601 FQPSFLGMEACGIHETTYNSIMKCDVDIRK 512
F+P G++ G+H+ + +I++C +D R+
Sbjct: 440 FKPKKWGLDTKGLHQLIHEAILQCPIDSRR 469
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASL 339
L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L
Sbjct: 308 LAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--L 363
Query: 338 STFQQMWISKQEYDESGPSIVHRKCF*T 255
+ + WI+++++DE G S+ F T
Sbjct: 364 TASKVPWINRKDWDERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASL 339
L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L
Sbjct: 308 LAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--L 363
Query: 338 STFQQMWISKQEYDESGPSIVHRKCF*T 255
+ + WI+++++DE G S+ F T
Sbjct: 364 TASKVPWINRKDWDERGDSLEFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.12
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Frame = -2
Query: 509 LYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK----YSVWIGG 357
L+ N +L+GG + PG+ R+++EI + + KI +I E K + W+G
Sbjct: 209 LFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIKNTPLFVSWLGA 268
Query: 356 SILASL-STFQQMWISKQEY 300
S+L SL T ++ ++ +E+
Sbjct: 269 SLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.48
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 366 PYGVLPLWRSNDLNLHCRWGESCD 437
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.48
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 366 PYGVLPLWRSNDLNLHCRWGESCD 437
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.48
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 366 PYGVLPLWRSNDLNLHCRWGESCD 437
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>AC006670-2|ABC71822.1| 901|Caenorhabditis elegans Patched related
family protein12, isoform a protein.
Length = 901
Score = 30.7 bits (66), Expect = 0.84
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +1
Query: 409 FIVDGARAVISFCIRSAIPGYMVV---PPDNTVLAYSPYGCPRR 531
F+ D A A+I C+ + G V P DN + Y+PYG R
Sbjct: 36 FVADHAVALIVICVVLTLIGTFKVATTPNDNDITGYTPYGARAR 79
>Z77136-3|CAB00886.1| 252|Caenorhabditis elegans Hypothetical
protein ZC376.4 protein.
Length = 252
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = -1
Query: 531 ATWTSVRTVRQHRIVRWYHHVPWNRRPYAKGNHSSRPIDNED*DHCSSREEV 376
A W ++Q RI +W+ NRR + + DNED S R V
Sbjct: 43 AEWAQTYQIQQRRIRKWFD----NRRTRDRERRKRKGDDNEDSSEISKRGRV 90
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,678,606
Number of Sequences: 27780
Number of extensions: 277345
Number of successful extensions: 800
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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