Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0871
         (502 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    25   0.29 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   6.2  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   8.2  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -3

Query: 152 DL*ARPLIDLPQIALNSLHCIH*IGGTLSNSNTISQRFFYCLDG 21
           D  +RP +  PQ    S HC    G        I  +F+YC+DG
Sbjct: 91  DCTSRPKLQEPQ---PSQHCPRKHGYFAHEEPHICDKFYYCVDG 131


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +2

Query: 23  HLSNKKTAEKLCWNWKGSPQSSECNVMNLMQFE 121
           HL N+    K+  N  G+ +   C +    QF+
Sbjct: 476 HLQNQDFTYKITVNNSGNNRMGTCRIFLAPQFD 508


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 77  PQSSECNVMNLMQFEAGQLT 136
           PQ  + NVM++MQ+   Q T
Sbjct: 232 PQQHKTNVMDVMQWWEQQQT 251


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,062
Number of Sequences: 336
Number of extensions: 917
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)