BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0871 (502 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY058641-1|AAL13870.1| 663|Drosophila melanogaster LD34105p pro... 29 3.5 AE014134-611|AAF51102.1| 663|Drosophila melanogaster CG3238-PA ... 29 3.5 AY113280-1|AAM29285.1| 780|Drosophila melanogaster AT17882p pro... 28 6.2 AE014134-330|AAF51314.1| 971|Drosophila melanogaster CG4238-PA ... 28 6.2 >AY058641-1|AAL13870.1| 663|Drosophila melanogaster LD34105p protein. Length = 663 Score = 29.1 bits (62), Expect = 3.5 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 4/49 (8%) Frame = +2 Query: 11 SSSNHLSNKKTAEKLCWNW---KGSPQSSECNVMNLMQ-FEAGQLTVSL 145 +S NH++ ++ KL W + K + +C M+L + FEAGQ V+L Sbjct: 537 ASGNHITRRQVPLKLAWAFSIHKSQGLTLDCVEMSLSKVFEAGQAYVAL 585 >AE014134-611|AAF51102.1| 663|Drosophila melanogaster CG3238-PA protein. Length = 663 Score = 29.1 bits (62), Expect = 3.5 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 4/49 (8%) Frame = +2 Query: 11 SSSNHLSNKKTAEKLCWNW---KGSPQSSECNVMNLMQ-FEAGQLTVSL 145 +S NH++ ++ KL W + K + +C M+L + FEAGQ V+L Sbjct: 537 ASGNHITRRQVPLKLAWAFSIHKSQGLTLDCVEMSLSKVFEAGQAYVAL 585 >AY113280-1|AAM29285.1| 780|Drosophila melanogaster AT17882p protein. Length = 780 Score = 28.3 bits (60), Expect = 6.2 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Frame = +2 Query: 17 SNHLSNKKTAE---KLCWNWKGSPQSSECNVMNLMQFEAG 127 ++H++N +AE L W W G S+ + L+QF G Sbjct: 675 AHHIANGNSAEFRRVLAWFWAGVSNFSQTEMARLLQFTTG 714 >AE014134-330|AAF51314.1| 971|Drosophila melanogaster CG4238-PA protein. Length = 971 Score = 28.3 bits (60), Expect = 6.2 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Frame = +2 Query: 17 SNHLSNKKTAE---KLCWNWKGSPQSSECNVMNLMQFEAG 127 ++H++N +AE L W W G S+ + L+QF G Sbjct: 866 AHHIANGNSAEFRRVLAWFWAGVSNFSQTEMARLLQFTTG 905 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,471,198 Number of Sequences: 53049 Number of extensions: 186423 Number of successful extensions: 376 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 373 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 376 length of database: 24,988,368 effective HSP length: 80 effective length of database: 20,744,448 effective search space used: 1784022528 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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