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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0868
         (616 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894...    75   6e-14
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341...    64   8e-11
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892...    60   2e-09
07_03_1414 - 26403361-26403969                                         31   0.96 
11_04_0414 + 17386806-17387936                                         30   1.3  
07_03_1422 + 26462871-26463434,26463772-26463897                       29   2.2  
07_03_1413 - 26396426-26396890                                         29   2.2  
12_01_0924 + 9161155-9161646,9161748-9162164,9162250-9162313,916...    28   5.1  
02_05_0292 + 27581862-27581913,27582395-27582615,27582691-275830...    28   5.1  
04_04_0188 - 23433753-23436572                                         28   6.8  
03_02_0635 + 9994327-9994644,9995510-9995706,9995806-9995941,999...    28   6.8  
05_03_0573 - 15635338-15635502,15637573-15637632,15637776-15638033     27   8.9  
05_01_0317 - 2481308-2481350,2481611-2481687,2481765-2481831,248...    27   8.9  
03_03_0006 - 13666961-13667755                                         27   8.9  

>09_04_0677 -
           19388888-19389019,19389124-19389216,19389317-19389445,
           19389559-19389728,19390280-19390481,19390576-19390623,
           19390797-19390799
          Length = 258

 Score = 74.5 bits (175), Expect = 6e-14
 Identities = 46/134 (34%), Positives = 61/134 (45%)
 Frame = +3

Query: 213 LVQICKMAQVYPHPRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 392
           L +  K  +V    RQ+ +L++RLKVPP +NQFT+TLDK  A  LFK+L KYRPE     
Sbjct: 44  LHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPE-DKAA 102

Query: 393 XXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVEKRRRXXXXXXXXXXXXXXXXXC 572
                                +P  ++ G N VT L+E+ +                   
Sbjct: 103 KKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWL 162

Query: 573 QRYARKMGVPYCIV 614
               RKM VPYCIV
Sbjct: 163 PALCRKMEVPYCIV 176



 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 24/39 (61%), Positives = 29/39 (74%)
 Frame = +1

Query: 148 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIHVRR 264
           NPLFEKRPK F IG  + P +DL RFV+WPK +RI  +R
Sbjct: 22  NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQR 60


>08_02_0211 -
           14333553-14333684,14333795-14333887,14334019-14334105,
           14334220-14334389,14334985-14335186,14335604-14335606
          Length = 228

 Score = 64.1 bits (149), Expect = 8e-11
 Identities = 37/101 (36%), Positives = 52/101 (51%)
 Frame = +3

Query: 213 LVQICKMAQVYPHPRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 392
           L +  K  +V    RQ+ +L++RLKVPP +NQFT+TLDK  A  LFK+L KYRPE     
Sbjct: 28  LHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPE-DKAA 86

Query: 393 XXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVEKRR 515
                                +P  ++ G N VT L+E+ +
Sbjct: 87  KKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSK 127



 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 24/39 (61%), Positives = 29/39 (74%)
 Frame = +1

Query: 148 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIHVRR 264
           NPLFEKRPK F IG  + P +DL RFV+WPK +RI  +R
Sbjct: 6   NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQR 44



 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 22/26 (84%), Positives = 25/26 (96%)
 Frame = +2

Query: 506 EKKAQLVVIAHDVDPIELVLFLPALC 583
           + KAQLVVIAHDVDPIELV++LPALC
Sbjct: 125 QSKAQLVVIAHDVDPIELVVWLPALC 150


>01_07_0018 -
           40488702-40488833,40488928-40489020,40489125-40489253,
           40489379-40489500,40490292-40490544,40490636-40490638
          Length = 243

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 25/39 (64%), Positives = 29/39 (74%)
 Frame = +1

Query: 148 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIHVRR 264
           NPLFEKRPK F IG  + P +DL RFVRWPK +RI  +R
Sbjct: 23  NPLFEKRPKQFGIGGALPPRKDLHRFVRWPKAVRIQRQR 61



 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 22/26 (84%), Positives = 25/26 (96%)
 Frame = +2

Query: 506 EKKAQLVVIAHDVDPIELVLFLPALC 583
           + KAQLVVIAHDVDPIELV++LPALC
Sbjct: 126 QSKAQLVVIAHDVDPIELVVWLPALC 151



 Score = 47.6 bits (108), Expect = 8e-06
 Identities = 34/120 (28%), Positives = 52/120 (43%)
 Frame = +3

Query: 255 RQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXX 434
           RQ+ VL++RLKVPP +NQFT+TLDK       ++L++ + E                   
Sbjct: 59  RQRRVLKQRLKVPPALNQFTRTLDKNLGCQKERLLKRAQAEA-----------------E 101

Query: 435 XXXXXXXRPNTIRSGTNTVTKLVEKRRRXXXXXXXXXXXXXXXXXCQRYARKMGVPYCIV 614
                  +P  ++ G + VT L+E+ +                       RKM +PYCIV
Sbjct: 102 GKTVEAKKPIVVKYGLDHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIV 161


>07_03_1414 - 26403361-26403969
          Length = 202

 Score = 30.7 bits (66), Expect = 0.96
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = -2

Query: 276 AEVQPSDVDADILGPSYKSGQVTSWLNALTNSKVLWPLLEERIHNFLGLNLFD 118
           A  +P+ + A +  P +  G++  + + +T  + L P LEE +    GL L+D
Sbjct: 70  AATKPTALSAAVSNPGFFFGRMVVFNDPVTEGRALPPSLEETVVRAQGLYLYD 122


>11_04_0414 + 17386806-17387936
          Length = 376

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 548 DQHHER*PQAAPSFLDQLGDCVCAGSDGVGPLW 450
           D+HH     AAPS ++Q+ D  C G    GP W
Sbjct: 215 DEHHPAAAAAAPS-IEQVFDLFCDGRSIAGPQW 246


>07_03_1422 + 26462871-26463434,26463772-26463897
          Length = 229

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -2

Query: 276 AEVQPSDVDADILGPSYKSGQVTSWLNALTNSKVLWPLLEERIHNFLGLNLFD 118
           A  +P+ +   +  P Y  G+V  + + +T  + L P LEE      GL L D
Sbjct: 68  AATKPTALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 120


>07_03_1413 - 26396426-26396890
          Length = 154

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -2

Query: 276 AEVQPSDVDADILGPSYKSGQVTSWLNALTNSKVLWPLLEERIHNFLGLNLFD 118
           A  +P+ +   +  P Y  G+V  + + +T  + L P LEE      GL L D
Sbjct: 22  AATKPTALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 74


>12_01_0924 +
           9161155-9161646,9161748-9162164,9162250-9162313,
           9162621-9163030
          Length = 460

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 230 DGPSISASTSEGCTSASSESAPSDQPIYPDTGQDYS*GPFQ 352
           D P +  S +E  +S +S  A  +QP  P T  D++ GP +
Sbjct: 268 DAPRVEVSPTERRSSCASTEAAEEQPPVP-TAVDHTMGPIE 307


>02_05_0292 +
           27581862-27581913,27582395-27582615,27582691-27583087,
           27583645-27583730,27584229-27584292,27584395-27584507,
           27584998-27585036,27585037-27585177
          Length = 370

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = -3

Query: 515 PSFLDQLGDCVCAGSDGVGPLWWRLIFL-----GNLSFSSFPQPLFP 390
           PS ++  G C+C GS   GP++    +L       L  S  P PL P
Sbjct: 57  PSLIEYFGYCLCCGSHFAGPVYEMKDYLEYTERKGLWASPTPSPLLP 103


>04_04_0188 - 23433753-23436572
          Length = 939

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 198 SANS*LVQICKMAQVYPHPRQKAVLQRRLKVPPPINQFTQTLD 326
           SA + L Q+CK   +    RQ A    R + PPP + +   LD
Sbjct: 21  SAGASLRQLCKDGDLREALRQLAARSARGRAPPPTDHYGWVLD 63


>03_02_0635 +
           9994327-9994644,9995510-9995706,9995806-9995941,
           9996019-9996270,9996356-9996588,9996695-9996812,
           9996884-9997036,9997126-9997212,9997407-9997697
          Length = 594

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +2

Query: 452 KEAQHHPIRHKH--SHQAGREKKAQLVVIAHDVDPI 553
           K  QHHP+ +KH  + +AG+ K A +  +  D D +
Sbjct: 321 KMCQHHPLEYKHLITIKAGKPKGAVVDALKGDPDKV 356


>05_03_0573 - 15635338-15635502,15637573-15637632,15637776-15638033
          Length = 160

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +2

Query: 119 SKRLSPRKL*ILS---SRRGQRTLLLVRAFSQLVTCPD 223
           S  L PR L +L    +RRG R L +VRA S  V  PD
Sbjct: 13  SPSLGPRSLRLLRGALARRGSRRLGVVRAASAEVAAPD 50


>05_01_0317 -
           2481308-2481350,2481611-2481687,2481765-2481831,
           2482756-2482878,2482968-2483087,2483557-2483642,
           2483960-2484070,2484194-2484274,2484475-2484546,
           2484631-2484809,2485257-2485485
          Length = 395

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 230 DGPSISASTSEGCTSASSESAPSDQPI 310
           D P+ +ASTS    +A+++ AP D P+
Sbjct: 54  DKPASAASTSSAADAAAADVAPKDIPV 80


>03_03_0006 - 13666961-13667755
          Length = 264

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 464 HHPIRHKHSHQAGREKKAQLVVI 532
           HH +RH+H H   R ++    V+
Sbjct: 100 HHRVRHRHRHHRDRGRRGHAAVV 122


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,632,193
Number of Sequences: 37544
Number of extensions: 306677
Number of successful extensions: 924
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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