Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0868
(616 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 106 3e-23
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 106 3e-23
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 106 3e-23
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 106 3e-23
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 106 3e-23
AY118345-1|AAM48374.1| 475|Drosophila melanogaster LP03545p pro... 33 0.31
AE014297-3240|AAF56068.1| 475|Drosophila melanogaster CG7031-PA... 33 0.31
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 33 0.40
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 33 0.40
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 106 bits (254), Expect = 3e-23
Identities = 55/120 (45%), Positives = 68/120 (56%)
Frame = +3
Query: 255 RQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXX 434
RQKAVLQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 70 RQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKG 129
Query: 435 XXXXXXXRPNTIRSGTNTVTKLVEKRRRXXXXXXXXXXXXXXXXXCQRYARKMGVPYCIV 614
+P+ + +GTNTVTKL+E+++ RKMGVPYCIV
Sbjct: 130 KDVEPKKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIV 189
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +1
Query: 148 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRI 252
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRV 68
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 106 bits (254), Expect = 3e-23
Identities = 55/120 (45%), Positives = 68/120 (56%)
Frame = +3
Query: 255 RQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXX 434
RQKAVLQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 70 RQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKG 129
Query: 435 XXXXXXXRPNTIRSGTNTVTKLVEKRRRXXXXXXXXXXXXXXXXXCQRYARKMGVPYCIV 614
+P+ + +GTNTVTKL+E+++ RKMGVPYCIV
Sbjct: 130 KDVEPKKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIV 189
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +1
Query: 148 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRI 252
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRV 68
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 106 bits (254), Expect = 3e-23
Identities = 55/120 (45%), Positives = 68/120 (56%)
Frame = +3
Query: 255 RQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXX 434
RQKAVLQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 70 RQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKG 129
Query: 435 XXXXXXXRPNTIRSGTNTVTKLVEKRRRXXXXXXXXXXXXXXXXXCQRYARKMGVPYCIV 614
+P+ + +GTNTVTKL+E+++ RKMGVPYCIV
Sbjct: 130 KDVEPKKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIV 189
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +1
Query: 148 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRI 252
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRV 68
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 106 bits (254), Expect = 3e-23
Identities = 55/120 (45%), Positives = 68/120 (56%)
Frame = +3
Query: 255 RQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXX 434
RQKAVLQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 70 RQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKG 129
Query: 435 XXXXXXXRPNTIRSGTNTVTKLVEKRRRXXXXXXXXXXXXXXXXXCQRYARKMGVPYCIV 614
+P+ + +GTNTVTKL+E+++ RKMGVPYCIV
Sbjct: 130 KDVEPKKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIV 189
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +1
Query: 148 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRI 252
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRV 68
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 106 bits (254), Expect = 3e-23
Identities = 55/120 (45%), Positives = 68/120 (56%)
Frame = +3
Query: 255 RQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXX 434
RQKAVLQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 70 RQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKG 129
Query: 435 XXXXXXXRPNTIRSGTNTVTKLVEKRRRXXXXXXXXXXXXXXXXXCQRYARKMGVPYCIV 614
+P+ + +GTNTVTKL+E+++ RKMGVPYCIV
Sbjct: 130 KDVEPKKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIV 189
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +1
Query: 148 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRI 252
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRV 68
>AY118345-1|AAM48374.1| 475|Drosophila melanogaster LP03545p
protein.
Length = 475
Score = 33.1 bits (72), Expect = 0.31
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 236 PSISASTSEGCTSASSESAPSDQPIYPDTGQDYS 337
PSIS S + +SASS S D +PD GQ+ S
Sbjct: 307 PSISGSAASSASSASSGSGADDFEEHPDAGQEQS 340
>AE014297-3240|AAF56068.1| 475|Drosophila melanogaster CG7031-PA
protein.
Length = 475
Score = 33.1 bits (72), Expect = 0.31
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 236 PSISASTSEGCTSASSESAPSDQPIYPDTGQDYS 337
PSIS S + +SASS S D +PD GQ+ S
Sbjct: 307 PSISGSAASSASSASSGSGADDFEEHPDAGQEQS 340
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 32.7 bits (71), Expect = 0.40
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 515 AQLVVIAHDVDPIELVLFLPALC 583
A +VV+A D +PIE++L LP LC
Sbjct: 50 ADIVVLAGDAEPIEILLHLPLLC 72
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 32.7 bits (71), Expect = 0.40
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 515 AQLVVIAHDVDPIELVLFLPALC 583
A +VV+A D +PIE++L LP LC
Sbjct: 50 ADIVVLAGDAEPIEILLHLPLLC 72
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,375,503
Number of Sequences: 53049
Number of extensions: 493721
Number of successful extensions: 1914
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1897
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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