BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0868 (616 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g62870.1 68416.m07063 60S ribosomal protein L7A (RPL7aB) 60S ... 77 1e-14 At2g47610.1 68415.m05940 60S ribosomal protein L7A (RPL7aA) 76 2e-14 At5g58340.1 68418.m07305 expressed protein ; expression supporte... 29 3.2 At5g15920.1 68418.m01862 structural maintenance of chromosomes (... 29 3.2 At5g07010.1 68418.m00794 sulfotransferase family protein similar... 28 4.3 At5g27390.1 68418.m03270 expressed protein CG6949 - Drosophila m... 27 7.5 At3g09210.1 68416.m01095 KOW domain-containing transcription fac... 27 7.5 At1g12640.1 68414.m01468 membrane bound O-acyl transferase (MBOA... 27 7.5 At5g52310.1 68418.m06492 low-temperature-responsive protein 78 (... 27 9.9 At1g63050.1 68414.m07122 membrane bound O-acyl transferase (MBOA... 27 9.9 At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 27 9.9 >At3g62870.1 68416.m07063 60S ribosomal protein L7A (RPL7aB) 60S RIBOSOMAL PROTEIN L7A - Oryza sativa, SWISSPROT:RL7A_ORYSA Length = 256 Score = 76.6 bits (180), Expect = 1e-14 Identities = 45/120 (37%), Positives = 56/120 (46%) Frame = +3 Query: 255 RQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXX 434 RQK +L++RLKVPP +NQFT+TLDK A LFKIL KYRPE Sbjct: 56 RQKRILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPE-DKAAKKERLLNKAQAEAE 114 Query: 435 XXXXXXXRPNTIRSGTNTVTKLVEKRRRXXXXXXXXXXXXXXXXXCQRYARKMGVPYCIV 614 +P ++ G N VT L+E+ + RKM VPYCIV Sbjct: 115 GKPAESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIV 174 Score = 56.0 bits (129), Expect = 2e-08 Identities = 21/35 (60%), Positives = 28/35 (80%) Frame = +1 Query: 148 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRI 252 NPLFE+RPK F IG + P +DLSR+++WPK IR+ Sbjct: 20 NPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRL 54 >At2g47610.1 68415.m05940 60S ribosomal protein L7A (RPL7aA) Length = 257 Score = 76.2 bits (179), Expect = 2e-14 Identities = 44/120 (36%), Positives = 56/120 (46%) Frame = +3 Query: 255 RQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXX 434 RQK +L++RLKVPP +NQFT+TLDK A LFK+L KYRPE Sbjct: 57 RQKRILKQRLKVPPALNQFTKTLDKNLATSLFKVLLKYRPE-DKAAKKERLVKKAQAEAE 115 Query: 435 XXXXXXXRPNTIRSGTNTVTKLVEKRRRXXXXXXXXXXXXXXXXXCQRYARKMGVPYCIV 614 +P ++ G N VT L+E+ + RKM VPYCIV Sbjct: 116 GKPSESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIV 175 Score = 56.0 bits (129), Expect = 2e-08 Identities = 21/35 (60%), Positives = 28/35 (80%) Frame = +1 Query: 148 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRI 252 NPLFE+RPK F IG + P +DLSR+++WPK IR+ Sbjct: 21 NPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRL 55 >At5g58340.1 68418.m07305 expressed protein ; expression supported by MPSS Length = 466 Score = 28.7 bits (61), Expect = 3.2 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = +2 Query: 431 QER*ASTKEAQHHPIRHKHSHQAGREKKAQLVVIAHDVDP 550 +E S ++ +H P K A RE K LV I +DP Sbjct: 272 EEHTVSAQDQEHEPSLDKGDEMAARELKEYLVEIQGHIDP 311 >At5g15920.1 68418.m01862 structural maintenance of chromosomes (SMC) family protein (MSS2) similar to SMC-related protein MSS2 [Arabidopsis thaliana] GI:9965743; contains Pfam profiles PF02483: SMC family C-terminal domain, PF02463: RecF/RecN/SMC N terminal domain Length = 1053 Score = 28.7 bits (61), Expect = 3.2 Identities = 17/53 (32%), Positives = 28/53 (52%) Frame = -3 Query: 473 SDGVGPLWWRLIFLGNLSFSSFPQPLFPGCFSLRPVFLQNLEKALSCSLVQCL 315 + G+ P+ R +F + +S QP P CF L P L LE + +CS++ + Sbjct: 971 NQGMDPINERKMFQQLVRAAS--QPNTPQCFLLTPKLLPELEYSEACSILNIM 1021 >At5g07010.1 68418.m00794 sulfotransferase family protein similar to steroid sulfotransferase 3 [Brassica napus] GI:3420008, steroid sulfotransferase 1 [Brassica napus] GI:3420004; contains Pfam profile PF00685: Sulfotransferase domain Length = 359 Score = 28.3 bits (60), Expect = 4.3 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = -3 Query: 518 APSFLDQLGDCVCAGSDGVGPLWWRLI 438 +P LDQ D C G G GP W ++ Sbjct: 212 SPVLLDQAFDLYCRGVIGFGPFWEHML 238 >At5g27390.1 68418.m03270 expressed protein CG6949 - Drosophila melanogaster, EMBL:AE003739 Length = 549 Score = 27.5 bits (58), Expect = 7.5 Identities = 11/41 (26%), Positives = 22/41 (53%) Frame = +3 Query: 186 WSGHSANS*LVQICKMAQVYPHPRQKAVLQRRLKVPPPINQ 308 + GHS N+ L++ +A+ P +K ++K PP + + Sbjct: 312 YEGHSVNTHLLRSTMIAEFLPFMNEKRSATTQVKAPPQLQK 352 >At3g09210.1 68416.m01095 KOW domain-containing transcription factor family protein ; est match Length = 333 Score = 27.5 bits (58), Expect = 7.5 Identities = 11/32 (34%), Positives = 19/32 (59%) Frame = -3 Query: 434 LGNLSFSSFPQPLFPGCFSLRPVFLQNLEKAL 339 L N S S P+P+FPGC +R + + + ++ Sbjct: 141 LKNGSISVKPKPVFPGCIFIRCILNKEIHDSI 172 >At1g12640.1 68414.m01468 membrane bound O-acyl transferase (MBOAT) family protein low similarity to porcupine from [Xenopus laevis] GI:6714514, GI:6714520, GI:6714518, GI:6714516; contains Pfam profile PF03062: MBOAT family Length = 462 Score = 27.5 bits (58), Expect = 7.5 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = -3 Query: 515 PSFLDQLGDCVCAGSDGVGPLW 450 PS ++ G C+C GS GP++ Sbjct: 157 PSLIEYFGYCLCCGSHFAGPVY 178 >At5g52310.1 68418.m06492 low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A) Length = 710 Score = 27.1 bits (57), Expect = 9.9 Identities = 11/40 (27%), Positives = 18/40 (45%) Frame = +2 Query: 218 PDL*DGPSISASTSEGCTSASSESAPSDQPIYPDTGQDYS 337 P++ D P ++ E AS E P ++P DY+ Sbjct: 71 PEVIDAPGVTGKPRETNVPASEEIIPPGTKVFPVVSSDYT 110 >At1g63050.1 68414.m07122 membrane bound O-acyl transferase (MBOAT) family protein low similarity to porcupine from [Xenopus laevis] GI:6714514, GI:6714520, GI:6714518, GI:6714516; contains Pfam profile PF03062: MBOAT family Length = 465 Score = 27.1 bits (57), Expect = 9.9 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = -3 Query: 515 PSFLDQLGDCVCAGSDGVGPLW 450 PS ++ G C+C GS GP++ Sbjct: 160 PSLIEYFGYCLCCGSHFAGPVF 181 >At1g29000.1 68414.m03546 heavy-metal-associated domain-containing protein similar to farnesylated protein ATFP3 [GI:4097547]; contains Pfam profile PF00403: Heavy-metal-associated domain Length = 287 Score = 27.1 bits (57), Expect = 9.9 Identities = 10/40 (25%), Positives = 22/40 (55%) Frame = +2 Query: 452 KEAQHHPIRHKHSHQAGREKKAQLVVIAHDVDPIELVLFL 571 K+ QH ++HK H + KAQ + + ++ +L+ ++ Sbjct: 128 KDLQHKLLKHKAIHIVKTDTKAQTLTVQGTIESAKLLAYI 167 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,189,231 Number of Sequences: 28952 Number of extensions: 231864 Number of successful extensions: 726 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 698 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 719 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1236350304 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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