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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0868
         (616 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g62870.1 68416.m07063 60S ribosomal protein L7A (RPL7aB) 60S ...    77   1e-14
At2g47610.1 68415.m05940 60S ribosomal protein L7A (RPL7aA)            76   2e-14
At5g58340.1 68418.m07305 expressed protein ; expression supporte...    29   3.2  
At5g15920.1 68418.m01862 structural maintenance of chromosomes (...    29   3.2  
At5g07010.1 68418.m00794 sulfotransferase family protein similar...    28   4.3  
At5g27390.1 68418.m03270 expressed protein CG6949 - Drosophila m...    27   7.5  
At3g09210.1 68416.m01095 KOW domain-containing transcription fac...    27   7.5  
At1g12640.1 68414.m01468 membrane bound O-acyl transferase (MBOA...    27   7.5  
At5g52310.1 68418.m06492 low-temperature-responsive protein 78 (...    27   9.9  
At1g63050.1 68414.m07122 membrane bound O-acyl transferase (MBOA...    27   9.9  
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin...    27   9.9  

>At3g62870.1 68416.m07063 60S ribosomal protein L7A (RPL7aB) 60S
           RIBOSOMAL PROTEIN L7A - Oryza sativa,
           SWISSPROT:RL7A_ORYSA
          Length = 256

 Score = 76.6 bits (180), Expect = 1e-14
 Identities = 45/120 (37%), Positives = 56/120 (46%)
 Frame = +3

Query: 255 RQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXX 434
           RQK +L++RLKVPP +NQFT+TLDK  A  LFKIL KYRPE                   
Sbjct: 56  RQKRILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPE-DKAAKKERLLNKAQAEAE 114

Query: 435 XXXXXXXRPNTIRSGTNTVTKLVEKRRRXXXXXXXXXXXXXXXXXCQRYARKMGVPYCIV 614
                  +P  ++ G N VT L+E+ +                       RKM VPYCIV
Sbjct: 115 GKPAESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIV 174



 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 21/35 (60%), Positives = 28/35 (80%)
 Frame = +1

Query: 148 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRI 252
           NPLFE+RPK F IG  + P +DLSR+++WPK IR+
Sbjct: 20  NPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRL 54


>At2g47610.1 68415.m05940 60S ribosomal protein L7A (RPL7aA)
          Length = 257

 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 44/120 (36%), Positives = 56/120 (46%)
 Frame = +3

Query: 255 RQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXX 434
           RQK +L++RLKVPP +NQFT+TLDK  A  LFK+L KYRPE                   
Sbjct: 57  RQKRILKQRLKVPPALNQFTKTLDKNLATSLFKVLLKYRPE-DKAAKKERLVKKAQAEAE 115

Query: 435 XXXXXXXRPNTIRSGTNTVTKLVEKRRRXXXXXXXXXXXXXXXXXCQRYARKMGVPYCIV 614
                  +P  ++ G N VT L+E+ +                       RKM VPYCIV
Sbjct: 116 GKPSESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIV 175



 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 21/35 (60%), Positives = 28/35 (80%)
 Frame = +1

Query: 148 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRI 252
           NPLFE+RPK F IG  + P +DLSR+++WPK IR+
Sbjct: 21  NPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRL 55


>At5g58340.1 68418.m07305 expressed protein ; expression supported
           by MPSS
          Length = 466

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +2

Query: 431 QER*ASTKEAQHHPIRHKHSHQAGREKKAQLVVIAHDVDP 550
           +E   S ++ +H P   K    A RE K  LV I   +DP
Sbjct: 272 EEHTVSAQDQEHEPSLDKGDEMAARELKEYLVEIQGHIDP 311


>At5g15920.1 68418.m01862 structural maintenance of chromosomes (SMC)
            family protein (MSS2) similar to SMC-related protein MSS2
            [Arabidopsis thaliana] GI:9965743; contains Pfam profiles
            PF02483: SMC family C-terminal domain, PF02463:
            RecF/RecN/SMC N terminal domain
          Length = 1053

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = -3

Query: 473  SDGVGPLWWRLIFLGNLSFSSFPQPLFPGCFSLRPVFLQNLEKALSCSLVQCL 315
            + G+ P+  R +F   +  +S  QP  P CF L P  L  LE + +CS++  +
Sbjct: 971  NQGMDPINERKMFQQLVRAAS--QPNTPQCFLLTPKLLPELEYSEACSILNIM 1021


>At5g07010.1 68418.m00794 sulfotransferase family protein similar to
           steroid sulfotransferase 3 [Brassica napus] GI:3420008,
           steroid sulfotransferase 1 [Brassica napus] GI:3420004;
           contains Pfam profile PF00685: Sulfotransferase domain
          Length = 359

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 518 APSFLDQLGDCVCAGSDGVGPLWWRLI 438
           +P  LDQ  D  C G  G GP W  ++
Sbjct: 212 SPVLLDQAFDLYCRGVIGFGPFWEHML 238


>At5g27390.1 68418.m03270 expressed protein CG6949 - Drosophila
           melanogaster, EMBL:AE003739
          Length = 549

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +3

Query: 186 WSGHSANS*LVQICKMAQVYPHPRQKAVLQRRLKVPPPINQ 308
           + GHS N+ L++   +A+  P   +K     ++K PP + +
Sbjct: 312 YEGHSVNTHLLRSTMIAEFLPFMNEKRSATTQVKAPPQLQK 352


>At3g09210.1 68416.m01095 KOW domain-containing transcription factor
           family protein ; est match
          Length = 333

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 434 LGNLSFSSFPQPLFPGCFSLRPVFLQNLEKAL 339
           L N S S  P+P+FPGC  +R +  + +  ++
Sbjct: 141 LKNGSISVKPKPVFPGCIFIRCILNKEIHDSI 172


>At1g12640.1 68414.m01468 membrane bound O-acyl transferase (MBOAT)
           family protein low similarity to porcupine from [Xenopus
           laevis] GI:6714514, GI:6714520, GI:6714518, GI:6714516;
           contains Pfam profile PF03062: MBOAT family
          Length = 462

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 515 PSFLDQLGDCVCAGSDGVGPLW 450
           PS ++  G C+C GS   GP++
Sbjct: 157 PSLIEYFGYCLCCGSHFAGPVY 178


>At5g52310.1 68418.m06492 low-temperature-responsive protein 78
           (LTI78) / desiccation-responsive protein 29A (RD29A)
          Length = 710

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +2

Query: 218 PDL*DGPSISASTSEGCTSASSESAPSDQPIYPDTGQDYS 337
           P++ D P ++    E    AS E  P    ++P    DY+
Sbjct: 71  PEVIDAPGVTGKPRETNVPASEEIIPPGTKVFPVVSSDYT 110


>At1g63050.1 68414.m07122 membrane bound O-acyl transferase (MBOAT)
           family protein low similarity to porcupine from [Xenopus
           laevis] GI:6714514, GI:6714520, GI:6714518, GI:6714516;
           contains Pfam profile PF03062: MBOAT family
          Length = 465

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 515 PSFLDQLGDCVCAGSDGVGPLW 450
           PS ++  G C+C GS   GP++
Sbjct: 160 PSLIEYFGYCLCCGSHFAGPVF 181


>At1g29000.1 68414.m03546 heavy-metal-associated domain-containing
           protein similar to farnesylated protein ATFP3
           [GI:4097547]; contains Pfam profile PF00403:
           Heavy-metal-associated domain
          Length = 287

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = +2

Query: 452 KEAQHHPIRHKHSHQAGREKKAQLVVIAHDVDPIELVLFL 571
           K+ QH  ++HK  H    + KAQ + +   ++  +L+ ++
Sbjct: 128 KDLQHKLLKHKAIHIVKTDTKAQTLTVQGTIESAKLLAYI 167


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,189,231
Number of Sequences: 28952
Number of extensions: 231864
Number of successful extensions: 726
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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