Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0867
         (450 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2M0W4 Cluster: GA19975-PA; n=4; Endopterygota|Rep: GA1...    48   7e-05
UniRef50_Q9VWA1 Cluster: Clathrin light chain; n=9; Endopterygot...    48   7e-05
UniRef50_UPI0000E4601B Cluster: PREDICTED: similar to clathryn l...    48   9e-05
UniRef50_P09496-2 Cluster: Isoform Non; n=45; Metazoa|Rep: Isofo...    45   7e-04
UniRef50_Q2PFR5 Cluster: Putative uncharacterized protein; n=7; ...    45   7e-04
UniRef50_P09496 Cluster: Clathrin light chain A; n=36; Euteleost...    45   9e-04
UniRef50_A7SZR4 Cluster: Predicted protein; n=1; Nematostella ve...    41   0.011
UniRef50_Q7NC18 Cluster: CdsA; n=1; Mycoplasma gallisepticum|Rep...    34   1.6  
UniRef50_Q7GEU5 Cluster: Putative uncharacterized protein; n=3; ...    33   2.9  

>UniRef50_Q2M0W4 Cluster: GA19975-PA; n=4; Endopterygota|Rep:
           GA19975-PA - Drosophila pseudoobscura (Fruit fly)
          Length = 222

 Score = 48.4 bits (110), Expect = 7e-05
 Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
 Frame = -2

Query: 413 SVEEGNEWARVYELCDFGP---RRGRDVARLRSIVLQLKQ 303
           ++E G EW R+ +LCDF P   + G+DV+R+RSI L LKQ
Sbjct: 174 TIEPGTEWERIAKLCDFNPKVNKAGKDVSRMRSIYLHLKQ 213


>UniRef50_Q9VWA1 Cluster: Clathrin light chain; n=9;
           Endopterygota|Rep: Clathrin light chain - Drosophila
           melanogaster (Fruit fly)
          Length = 219

 Score = 48.4 bits (110), Expect = 7e-05
 Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
 Frame = -2

Query: 413 SVEEGNEWARVYELCDFGP---RRGRDVARLRSIVLQLKQ 303
           ++E G EW R+ +LCDF P   + G+DV+R+RSI L LKQ
Sbjct: 171 TIEPGTEWERIAKLCDFNPKVNKAGKDVSRMRSIYLHLKQ 210


>UniRef50_UPI0000E4601B Cluster: PREDICTED: similar to clathryn
           light chain (LCA3), partial; n=4; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to clathryn light
           chain (LCA3), partial - Strongylocentrotus purpuratus
          Length = 169

 Score = 48.0 bits (109), Expect = 9e-05
 Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
 Frame = -2

Query: 410 VEEGNEWARVYELCDFGPRRG---RDVARLRSIVLQLKQAGSRPN 285
           +  G EW R+  LCDF P+     +D+ R RSI+L LKQ+G +P+
Sbjct: 124 ITPGQEWERIARLCDFNPKNNKNLKDITRFRSILLHLKQSGVQPS 168


>UniRef50_P09496-2 Cluster: Isoform Non; n=45; Metazoa|Rep: Isoform
           Non - Homo sapiens (Human)
          Length = 218

 Score = 45.2 bits (102), Expect = 7e-04
 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 6/53 (11%)
 Frame = -2

Query: 440 RAPPQGSESSVEE---GNEWARVYELCDFGP---RRGRDVARLRSIVLQLKQA 300
           RA  +   + ++E   G EW RV  LCDF P   ++ +DV+R+RS+++ LKQA
Sbjct: 162 RAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQA 214


>UniRef50_Q2PFR5 Cluster: Putative uncharacterized protein; n=7;
           Eutheria|Rep: Putative uncharacterized protein - Macaca
           fascicularis (Crab eating macaque) (Cynomolgus monkey)
          Length = 101

 Score = 45.2 bits (102), Expect = 7e-04
 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 6/53 (11%)
 Frame = -2

Query: 440 RAPPQGSESSVEE---GNEWARVYELCDFGP---RRGRDVARLRSIVLQLKQA 300
           RA  +   + ++E   G EW RV  LCDF P   ++ +DV+R+RS+++ LKQA
Sbjct: 45  RAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQA 97


>UniRef50_P09496 Cluster: Clathrin light chain A; n=36;
           Euteleostomi|Rep: Clathrin light chain A - Homo sapiens
           (Human)
          Length = 248

 Score = 44.8 bits (101), Expect = 9e-04
 Identities = 19/37 (51%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
 Frame = -2

Query: 401 GNEWARVYELCDFGP---RRGRDVARLRSIVLQLKQA 300
           G EW RV  LCDF P   ++ +DV+R+RS+++ LKQA
Sbjct: 208 GTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQA 244


>UniRef50_A7SZR4 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 198

 Score = 41.1 bits (92), Expect = 0.011
 Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
 Frame = -2

Query: 401 GNEWARVYELCDFGPR---RGRDVARLRSIVLQLKQ 303
           G EW +V   CDF P+     +DV+R+RSI LQLKQ
Sbjct: 157 GTEWEKVCRACDFNPKATKNTKDVSRMRSIFLQLKQ 192


>UniRef50_Q7NC18 Cluster: CdsA; n=1; Mycoplasma gallisepticum|Rep:
           CdsA - Mycoplasma gallisepticum
          Length = 376

 Score = 33.9 bits (74), Expect = 1.6
 Identities = 24/84 (28%), Positives = 38/84 (45%)
 Frame = -1

Query: 327 VNCASAQASWISPKLPITCY*SGLNNITVCIISYYIISPLSKITLIIFINIRQANINNVQ 148
           VN    Q S + P+L +  Y    +N  + +I   II  L+ I   IF+ + Q  +N + 
Sbjct: 118 VNIVLIQFSIVKPELTLIVYHDKFSNNMIFLIIVGIILLLNLIINPIFLKLNQ-RLNKIN 176

Query: 147 AKHNSGLEPCYLLKLFCIYYVMAN 76
             H   L   + L  + I YV+ N
Sbjct: 177 LLHLFSLSIIFSLGFYGINYVLLN 200


>UniRef50_Q7GEU5 Cluster: Putative uncharacterized protein; n=3;
           Candida parapsilosis|Rep: Putative uncharacterized
           protein - Candida parapsilosis (Yeast)
          Length = 933

 Score = 33.1 bits (72), Expect = 2.9
 Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = -3

Query: 430 LKDLKVVWRKEMNGPGFMSFVTLDPVEEGMWHAYGQLCFSSSKLDLAQTT-HHVLLKWLE 254
           ++ LK++++K MN   +     L+P+  G W  Y  +  SS   D  + + +H++ +W  
Sbjct: 688 IEKLKLIFKKSMNLDAYNLITKLNPILRG-WSNYYNMGNSSHYRDTVRNSLYHLIWRWAH 746

Query: 253 *HHSLYN 233
             H  +N
Sbjct: 747 RKHRRWN 753


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 441,386,387
Number of Sequences: 1657284
Number of extensions: 8865669
Number of successful extensions: 20556
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20540
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)