Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0867
         (450 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   1.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   1.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   2.3  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   2.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   2.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   2.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   5.4  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = -1

Query: 258 LNNITVCIISYYIISPLSKITLIIFINIRQANINNVQAKHNSGLEPCYLLKLFCIYYVM 82
           L N++V    Y I+  L+ + L  ++ I +  +  +QA         Y L LFC+ YV+
Sbjct: 132 LRNVSVQFFVYVILYILATVFLA-YVWICEMGVVTLQA---------YTLHLFCVLYVV 180


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = -1

Query: 258 LNNITVCIISYYIISPLSKITLIIFINIRQANINNVQAKHNSGLEPCYLLKLFCIYYVM 82
           L N++V    Y I+  L+ + L  ++ I +  +  +QA         Y L LFC+ YV+
Sbjct: 132 LRNVSVQFFVYVILYILATVFLA-YVWICEMGVVTLQA---------YTLHLFCVLYVV 180


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 322 LCFSSSKLDLAQTTHHVLLKW 260
           L  + S +DL+Q T++V L W
Sbjct: 274 LVINESIIDLSQQTYNVHLMW 294


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +2

Query: 341 HPFLDGVQSHKAHKPGPIHFLPP 409
           H    G Q    H+ GP H  PP
Sbjct: 187 HMMYGGQQGANMHQQGPPHQQPP 209


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 120 CYLLKLFCIYYV 85
           CY + LF +YY+
Sbjct: 148 CYFIYLFTVYYI 159


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +2

Query: 341 HPFLDGVQSHKAHKPGPIHFLPP 409
           H    G Q    H+ GP H  PP
Sbjct: 189 HMMYGGQQGANMHQQGPPHQQPP 211


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 120 CYLLKLFCIYY 88
           C L+ L CIYY
Sbjct: 230 CVLIILLCIYY 240



 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 120 CYLLKLFCIYY 88
           C L+ L CIYY
Sbjct: 290 CALIILLCIYY 300


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 107 FNK*QGSKPLLCFA*TLLILACLIFIKIINVIFESGLII 223
           FN+  G   LL FA + LI+  +IF  +I V+ +S  I+
Sbjct: 236 FNEIFGLGLLLMFAVSFLIITQVIF--VICVLVQSEKIV 272


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,130
Number of Sequences: 336
Number of extensions: 2298
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)