Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0867
(450 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ270158-1|ABB76683.1| 236|Homo sapiens brain-specific clathrin... 49 8e-06
M20472-1|AAA59505.1| 218|Homo sapiens CLTA protein. 45 1e-04
BT007170-1|AAP35834.1| 218|Homo sapiens clathrin, light polypep... 45 1e-04
BC019287-1|AAH19287.1| 218|Homo sapiens clathrin, light chain (... 45 1e-04
BC009201-1|AAH09201.1| 218|Homo sapiens clathrin, light chain (... 45 1e-04
AL158830-5|CAD13387.1| 218|Homo sapiens clathrin, light chain (... 45 1e-04
M20471-1|AAA51817.1| 248|Homo sapiens CLTA protein. 45 1e-04
M20469-1|AAA51818.1| 229|Homo sapiens CLTB protein. 45 1e-04
AL158830-6|CAD13388.1| 248|Homo sapiens clathrin, light chain (... 45 1e-04
M20470-1|AAA59506.1| 211|Homo sapiens CLTB protein. 43 6e-04
CR536577-1|CAG38814.1| 211|Homo sapiens CLTB protein. 43 6e-04
BT007028-1|AAP35675.1| 211|Homo sapiens clathrin, light polypep... 43 6e-04
BC006457-1|AAH06457.1| 211|Homo sapiens clathrin, light chain (... 43 6e-04
BC006332-1|AAH06332.1| 211|Homo sapiens clathrin, light chain (... 43 6e-04
AL163281-2|CAB90444.1| 1029|Homo sapiens human CHD2-52 down synd... 31 2.4
AF217525-1|AAF27525.1| 2012|Homo sapiens Down syndrome cell adhe... 31 2.4
AB209136-1|BAD92373.1| 2023|Homo sapiens Down syndrome cell adhe... 31 2.4
AL161779-2|CAI42091.1| 1478|Homo sapiens IQ motif and Sec7 domai... 29 9.7
AL139396-1|CAI39832.1| 1478|Homo sapiens IQ motif and Sec7 domai... 29 9.7
AB011094-1|BAA25448.1| 1560|Homo sapiens KIAA0522 protein protein. 29 9.7
>DQ270158-1|ABB76683.1| 236|Homo sapiens brain-specific clathrin
light polypeptide protein.
Length = 236
Score = 48.8 bits (111), Expect = 8e-06
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 6/56 (10%)
Frame = -2
Query: 449 IGYRAPPQGSESSVEE---GNEWARVYELCDFGP---RRGRDVARLRSIVLQLKQA 300
IGY A + + ++E G EW RV LCDF P ++ +DV+R+RS+++ LKQA
Sbjct: 177 IGYVAAEEAFVNDIDESSQGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQA 232
>M20472-1|AAA59505.1| 218|Homo sapiens CLTA protein.
Length = 218
Score = 45.2 bits (102), Expect = 1e-04
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 6/53 (11%)
Frame = -2
Query: 440 RAPPQGSESSVEE---GNEWARVYELCDFGP---RRGRDVARLRSIVLQLKQA 300
RA + + ++E G EW RV LCDF P ++ +DV+R+RS+++ LKQA
Sbjct: 162 RAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQA 214
>BT007170-1|AAP35834.1| 218|Homo sapiens clathrin, light
polypeptide (Lca) protein.
Length = 218
Score = 45.2 bits (102), Expect = 1e-04
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 6/53 (11%)
Frame = -2
Query: 440 RAPPQGSESSVEE---GNEWARVYELCDFGP---RRGRDVARLRSIVLQLKQA 300
RA + + ++E G EW RV LCDF P ++ +DV+R+RS+++ LKQA
Sbjct: 162 RAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQA 214
>BC019287-1|AAH19287.1| 218|Homo sapiens clathrin, light chain
(Lca) protein.
Length = 218
Score = 45.2 bits (102), Expect = 1e-04
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 6/53 (11%)
Frame = -2
Query: 440 RAPPQGSESSVEE---GNEWARVYELCDFGP---RRGRDVARLRSIVLQLKQA 300
RA + + ++E G EW RV LCDF P ++ +DV+R+RS+++ LKQA
Sbjct: 162 RAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQA 214
>BC009201-1|AAH09201.1| 218|Homo sapiens clathrin, light chain
(Lca) protein.
Length = 218
Score = 45.2 bits (102), Expect = 1e-04
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 6/53 (11%)
Frame = -2
Query: 440 RAPPQGSESSVEE---GNEWARVYELCDFGP---RRGRDVARLRSIVLQLKQA 300
RA + + ++E G EW RV LCDF P ++ +DV+R+RS+++ LKQA
Sbjct: 162 RAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQA 214
>AL158830-5|CAD13387.1| 218|Homo sapiens clathrin, light chain
(Lca) protein.
Length = 218
Score = 45.2 bits (102), Expect = 1e-04
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 6/53 (11%)
Frame = -2
Query: 440 RAPPQGSESSVEE---GNEWARVYELCDFGP---RRGRDVARLRSIVLQLKQA 300
RA + + ++E G EW RV LCDF P ++ +DV+R+RS+++ LKQA
Sbjct: 162 RAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQA 214
>M20471-1|AAA51817.1| 248|Homo sapiens CLTA protein.
Length = 248
Score = 44.8 bits (101), Expect = 1e-04
Identities = 19/37 (51%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
Frame = -2
Query: 401 GNEWARVYELCDFGP---RRGRDVARLRSIVLQLKQA 300
G EW RV LCDF P ++ +DV+R+RS+++ LKQA
Sbjct: 208 GTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQA 244
>M20469-1|AAA51818.1| 229|Homo sapiens CLTB protein.
Length = 229
Score = 44.8 bits (101), Expect = 1e-04
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 6/55 (10%)
Frame = -2
Query: 449 IGYRAPPQGS-ESSVEE--GNEWARVYELCDFGPRRG---RDVARLRSIVLQLKQ 303
IGY A + + S EE G EW +V +LCDF P+ +DV+RLRS+++ LKQ
Sbjct: 170 IGYVASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 224
>AL158830-6|CAD13388.1| 248|Homo sapiens clathrin, light chain
(Lca) protein.
Length = 248
Score = 44.8 bits (101), Expect = 1e-04
Identities = 19/37 (51%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
Frame = -2
Query: 401 GNEWARVYELCDFGP---RRGRDVARLRSIVLQLKQA 300
G EW RV LCDF P ++ +DV+R+RS+++ LKQA
Sbjct: 208 GTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQA 244
>M20470-1|AAA59506.1| 211|Homo sapiens CLTB protein.
Length = 211
Score = 42.7 bits (96), Expect = 6e-04
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Frame = -2
Query: 401 GNEWARVYELCDFGPRRG---RDVARLRSIVLQLKQ 303
G EW +V +LCDF P+ +DV+RLRS+++ LKQ
Sbjct: 171 GTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 206
>CR536577-1|CAG38814.1| 211|Homo sapiens CLTB protein.
Length = 211
Score = 42.7 bits (96), Expect = 6e-04
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Frame = -2
Query: 401 GNEWARVYELCDFGPRRG---RDVARLRSIVLQLKQ 303
G EW +V +LCDF P+ +DV+RLRS+++ LKQ
Sbjct: 171 GTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 206
>BT007028-1|AAP35675.1| 211|Homo sapiens clathrin, light
polypeptide (Lcb) protein.
Length = 211
Score = 42.7 bits (96), Expect = 6e-04
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Frame = -2
Query: 401 GNEWARVYELCDFGPRRG---RDVARLRSIVLQLKQ 303
G EW +V +LCDF P+ +DV+RLRS+++ LKQ
Sbjct: 171 GTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 206
>BC006457-1|AAH06457.1| 211|Homo sapiens clathrin, light chain
(Lcb) protein.
Length = 211
Score = 42.7 bits (96), Expect = 6e-04
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Frame = -2
Query: 401 GNEWARVYELCDFGPRRG---RDVARLRSIVLQLKQ 303
G EW +V +LCDF P+ +DV+RLRS+++ LKQ
Sbjct: 171 GTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 206
>BC006332-1|AAH06332.1| 211|Homo sapiens clathrin, light chain
(Lcb) protein.
Length = 211
Score = 42.7 bits (96), Expect = 6e-04
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Frame = -2
Query: 401 GNEWARVYELCDFGPRRG---RDVARLRSIVLQLKQ 303
G EW +V +LCDF P+ +DV+RLRS+++ LKQ
Sbjct: 171 GTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 206
>AL163281-2|CAB90444.1| 1029|Homo sapiens human CHD2-52 down
syndrome cell adhesion molecule protein.
Length = 1029
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +2
Query: 371 KAHKPGPIHFLPPHY---FQILEGGPGT 445
KAH+PG + LPP+ F + GGPGT
Sbjct: 908 KAHRPGDLIHLPPYLRMDFLLNRGGPGT 935
>AF217525-1|AAF27525.1| 2012|Homo sapiens Down syndrome cell adhesion
molecule protein.
Length = 2012
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +2
Query: 371 KAHKPGPIHFLPPHY---FQILEGGPGT 445
KAH+PG + LPP+ F + GGPGT
Sbjct: 1891 KAHRPGDLIHLPPYLRMDFLLNRGGPGT 1918
>AB209136-1|BAD92373.1| 2023|Homo sapiens Down syndrome cell adhesion
molecule isoform CHD2-42 precursor variant protein.
Length = 2023
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +2
Query: 371 KAHKPGPIHFLPPHY---FQILEGGPGT 445
KAH+PG + LPP+ F + GGPGT
Sbjct: 1902 KAHRPGDLIHLPPYLRMDFLLNRGGPGT 1929
>AL161779-2|CAI42091.1| 1478|Homo sapiens IQ motif and Sec7 domain 2
protein.
Length = 1478
Score = 28.7 bits (61), Expect = 9.7
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
Frame = +2
Query: 338 PHPFLDGVQSHK-AHKPGPIHFLPPHYFQIL-----EGGPGTQ 448
P P H AHK GP HF+ H+ Q++ GGPG++
Sbjct: 1357 PLPLYSPAPQHPPAHKQGPKHFIFSHHPQMMPAAGAAGGPGSR 1399
>AL139396-1|CAI39832.1| 1478|Homo sapiens IQ motif and Sec7 domain 2
protein.
Length = 1478
Score = 28.7 bits (61), Expect = 9.7
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
Frame = +2
Query: 338 PHPFLDGVQSHK-AHKPGPIHFLPPHYFQIL-----EGGPGTQ 448
P P H AHK GP HF+ H+ Q++ GGPG++
Sbjct: 1357 PLPLYSPAPQHPPAHKQGPKHFIFSHHPQMMPAAGAAGGPGSR 1399
>AB011094-1|BAA25448.1| 1560|Homo sapiens KIAA0522 protein protein.
Length = 1560
Score = 28.7 bits (61), Expect = 9.7
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
Frame = +2
Query: 338 PHPFLDGVQSHK-AHKPGPIHFLPPHYFQIL-----EGGPGTQ 448
P P H AHK GP HF+ H+ Q++ GGPG++
Sbjct: 1434 PLPLYSPAPQHPPAHKQGPKHFIFSHHPQMMPAAGAAGGPGSR 1476
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,022,482
Number of Sequences: 237096
Number of extensions: 1515250
Number of successful extensions: 2199
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2185
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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