Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0867
         (450 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121633-1|AAM51960.1|  219|Drosophila melanogaster GM02293p pro...    48   4e-06
AF055900-1|AAC14276.1|  228|Drosophila melanogaster clathrin lig...    48   4e-06
AE014296-3305|AAF49047.1|  219|Drosophila melanogaster CG6948-PA...    48   4e-06
AY119475-1|AAM50129.1| 1470|Drosophila melanogaster GH05619p pro...    30   1.2  
AE014297-2096|AAF55237.2| 1470|Drosophila melanogaster CG31150-P...    30   1.2  
AE014134-3118|AAF53815.3| 1356|Drosophila melanogaster CG10186-P...    28   6.7  
AE014134-3117|AAN11047.1| 1676|Drosophila melanogaster CG10186-P...    28   6.7  

>AY121633-1|AAM51960.1|  219|Drosophila melanogaster GM02293p
           protein.
          Length = 219

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
 Frame = -2

Query: 413 SVEEGNEWARVYELCDFGP---RRGRDVARLRSIVLQLKQ 303
           ++E G EW R+ +LCDF P   + G+DV+R+RSI L LKQ
Sbjct: 171 TIEPGTEWERIAKLCDFNPKVNKAGKDVSRMRSIYLHLKQ 210


>AF055900-1|AAC14276.1|  228|Drosophila melanogaster clathrin light
           chain protein.
          Length = 228

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
 Frame = -2

Query: 413 SVEEGNEWARVYELCDFGP---RRGRDVARLRSIVLQLKQ 303
           ++E G EW R+ +LCDF P   + G+DV+R+RSI L LKQ
Sbjct: 171 TIEPGTEWERIAKLCDFNPKVNKAGKDVSRMRSIYLHLKQ 210


>AE014296-3305|AAF49047.1|  219|Drosophila melanogaster CG6948-PA
           protein.
          Length = 219

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
 Frame = -2

Query: 413 SVEEGNEWARVYELCDFGP---RRGRDVARLRSIVLQLKQ 303
           ++E G EW R+ +LCDF P   + G+DV+R+RSI L LKQ
Sbjct: 171 TIEPGTEWERIAKLCDFNPKVNKAGKDVSRMRSIYLHLKQ 210


>AY119475-1|AAM50129.1| 1470|Drosophila melanogaster GH05619p protein.
          Length = 1470

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +1

Query: 118  TRL*TTIVFCL-NIINIGLSYIYKNN*CDLRKRTDNIIRYYTNCDV 252
            T+L +TI F L NI+N  +  +YK+  C L  +  N ++ YT C++
Sbjct: 1405 TQLSSTIQFDLYNILNFEIYGVYKHQMCGLCSKPLNRMQNYTICEL 1450


>AE014297-2096|AAF55237.2| 1470|Drosophila melanogaster CG31150-PA
            protein.
          Length = 1470

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +1

Query: 118  TRL*TTIVFCL-NIINIGLSYIYKNN*CDLRKRTDNIIRYYTNCDV 252
            T+L +TI F L NI+N  +  +YK+  C L  +  N ++ YT C++
Sbjct: 1405 TQLSSTIQFDLYNILNFEIYGVYKHQMCGLCSKPLNRMQNYTICEL 1450


>AE014134-3118|AAF53815.3| 1356|Drosophila melanogaster CG10186-PC,
            isoform C protein.
          Length = 1356

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 139  VFCLNIINIGLSYIYKNN*CDLRKRTDNIIRYYTNCDV 252
            + C N + IG SY  +N  C  R    N++ +Y + ++
Sbjct: 1205 IICDNGLWIGRSYNCENGTCVFRNNEANVVSFYNDLEI 1242


>AE014134-3117|AAN11047.1| 1676|Drosophila melanogaster CG10186-PA,
            isoform A protein.
          Length = 1676

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 139  VFCLNIINIGLSYIYKNN*CDLRKRTDNIIRYYTNCDV 252
            + C N + IG SY  +N  C  R    N++ +Y + ++
Sbjct: 1205 IICDNGLWIGRSYNCENGTCVFRNNEANVVSFYNDLEI 1242


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,566,207
Number of Sequences: 53049
Number of extensions: 403575
Number of successful extensions: 843
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)