BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0864 (638 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_04_0848 - 28677545-28677635,28677760-28677887,28678020-286781... 35 0.047 07_03_0391 - 17587144-17587323,17587460-17587566,17587664-175877... 33 0.19 12_01_0259 - 1905291-1905393,1905536-1905672,1905787-1905893,190... 32 0.44 11_01_0261 - 1989988-1990090,1990232-1990368,1990483-1990589,199... 32 0.44 11_03_0126 + 10371536-10371596,10372467-10372544,10373968-103741... 30 1.8 10_08_0271 - 16382655-16384451 28 7.2 09_01_0008 - 233137-233279,233712-233827,235376-235720,236218-23... 28 7.2 >04_04_0848 - 28677545-28677635,28677760-28677887,28678020-28678126, 28678242-28678320,28678426-28678515,28678603-28678854, 28680351-28680497,28680711-28681035,28681177-28681406 Length = 482 Score = 35.1 bits (77), Expect = 0.047 Identities = 22/70 (31%), Positives = 33/70 (47%) Frame = +2 Query: 266 PIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFLNLE 445 PIIG F F A ++ Y R ++ GP+F L G+ ++ + DP + +F E Sbjct: 50 PIIGETFQFFRASPSIDMPSYYKQRLERYGPLFKTSLVGRPVIISL-DPEVNRFIF-QQE 107 Query: 446 GKYPAHILPE 475 GK PE Sbjct: 108 GKLFQSWYPE 117 >07_03_0391 - 17587144-17587323,17587460-17587566,17587664-17587742, 17587850-17587939,17588337-17588588,17588748-17588894, 17589071-17589246,17589303-17589394,17589582-17589673 Length = 404 Score = 33.1 bits (72), Expect = 0.19 Identities = 20/67 (29%), Positives = 31/67 (46%) Frame = +2 Query: 266 PIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFLNLE 445 P++G F F A ++ Y R ++ GP+F L G+ LV DP + +F E Sbjct: 4 PVVGETFQFFRASPSVDMPSYYKQRLERYGPLFKTSLVGQ-PLVVSLDPEVNRFIFQQEE 62 Query: 446 GKYPAHI 466 P H+ Sbjct: 63 ---PHHV 66 >12_01_0259 - 1905291-1905393,1905536-1905672,1905787-1905893, 1906012-1906090,1906256-1906342,1906987-1907265, 1907401-1908114 Length = 501 Score = 31.9 bits (69), Expect = 0.44 Identities = 22/63 (34%), Positives = 31/63 (49%) Frame = +2 Query: 263 LPIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFLNL 442 LP+IG L SA N +ID R + G +F + G+ + VF +DP L L Sbjct: 49 LPLIGETLRLISAYKTPNPEPFIDERVARHGGVFTTHVFGE-RTVFSADPA-FNRLLLAA 106 Query: 443 EGK 451 EG+ Sbjct: 107 EGR 109 >11_01_0261 - 1989988-1990090,1990232-1990368,1990483-1990589, 1990708-1990786,1990952-1991038,1991688-1991966, 1992109-1992822 Length = 501 Score = 31.9 bits (69), Expect = 0.44 Identities = 22/63 (34%), Positives = 31/63 (49%) Frame = +2 Query: 263 LPIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFLNL 442 LP+IG L SA N +ID R + G +F + G+ + VF +DP L L Sbjct: 49 LPLIGETLRLISAYKTPNPEPFIDERVARHGGVFTTHVFGE-RTVFSADPA-FNRLLLAA 106 Query: 443 EGK 451 EG+ Sbjct: 107 EGR 109 >11_03_0126 + 10371536-10371596,10372467-10372544,10373968-10374127, 10374286-10374610,10374708-10374860,10374985-10375236, 10375356-10375445,10375543-10375621,10375712-10375818, 10375921-10376048,10376329-10376419 Length = 507 Score = 29.9 bits (64), Expect = 1.8 Identities = 20/70 (28%), Positives = 29/70 (41%) Frame = +2 Query: 266 PIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFLNLE 445 PI+G F F ++ Y R ++ GPIF + G+ +V DP + E Sbjct: 73 PIVGETFQFFRTSPSIDMPIYYKRRLERYGPIFKTNIGGQ-HVVISLDP-EVNQFIFQQE 130 Query: 446 GKYPAHILPE 475 GK PE Sbjct: 131 GKLFQSWFPE 140 >10_08_0271 - 16382655-16384451 Length = 598 Score = 27.9 bits (59), Expect = 7.2 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = -3 Query: 246 SHLWYVEIYEA*LTLNIDYCYDS 178 S LW++ + A +TL + +CYDS Sbjct: 16 SRLWFMVVLSATVTLLVRHCYDS 38 >09_01_0008 - 233137-233279,233712-233827,235376-235720,236218-236292, 236508-236636,237516-237589,237836-237968,239366-239584, 239671-239756,239843-241107,241304-241640,242548-242862, 243614-243697,243776-243883,243981-244079 Length = 1175 Score = 27.9 bits (59), Expect = 7.2 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = +1 Query: 91 LLKWLLISGSSLI*-KCIVSRR--CLPLDRLLGVVTVIDVQCQLSL 219 L W L SG L +C S R C+ +D GVV V D CQL L Sbjct: 1110 LYAWELSSGRKLAGTQCFNSGRVSCVAVDAKSGVVAVADDGCQLVL 1155 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,521,868 Number of Sequences: 37544 Number of extensions: 361232 Number of successful extensions: 784 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 762 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 784 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1573040476 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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