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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0864
         (638 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_24846| Best HMM Match : No HMM Matches (HMM E-Value=.)              46   3e-05
SB_24479| Best HMM Match : No HMM Matches (HMM E-Value=.)              46   3e-05
SB_23796| Best HMM Match : p450 (HMM E-Value=1.3e-19)                  36   0.037
SB_32060| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.049
SB_57426| Best HMM Match : Arteri_nucleo (HMM E-Value=7.6)             30   1.4  
SB_19770| Best HMM Match : LRR_1 (HMM E-Value=1.7e-06)                 29   2.4  
SB_34557| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.2  
SB_26726| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.2  
SB_1738| Best HMM Match : p450 (HMM E-Value=0)                         29   4.2  
SB_24421| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.2  
SB_1760| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   5.6  
SB_39637| Best HMM Match : SAA (HMM E-Value=5.5)                       28   7.4  
SB_29730| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.7  

>SB_24846| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 388

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 28/67 (41%), Positives = 34/67 (50%)
 Frame = +2

Query: 257 KSLPIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFL 436
           K LP IG+  D    GG   LH       K+ GPI+ + L G T  V ISDP  +  +  
Sbjct: 66  KGLPWIGSIHDYILKGGFSKLHLLRQSYFKRYGPIYKDHLMG-TTTVNISDPEEITKVIR 124

Query: 437 NLEGKYP 457
           N EGKYP
Sbjct: 125 N-EGKYP 130


>SB_24479| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 758

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 28/67 (41%), Positives = 34/67 (50%)
 Frame = +2

Query: 257 KSLPIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFL 436
           K LP IG+       GG   LH       K+ GPI+ + L G T  V ISDP  +  +F 
Sbjct: 13  KGLPWIGSIHGYILKGGVSKLHLLHQSYFKKYGPIYKDHLMG-TTTVSISDPEDIAKVFR 71

Query: 437 NLEGKYP 457
           N EGKYP
Sbjct: 72  N-EGKYP 77


>SB_23796| Best HMM Match : p450 (HMM E-Value=1.3e-19)
          Length = 461

 Score = 35.5 bits (78), Expect = 0.037
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +2

Query: 260 SLPIIGTKFDLFSAGGG-KNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFL 436
           +LP +G+     S   G K + +       + GPI+ E L G+T  V I  P   + +F 
Sbjct: 52  ALPYVGSVHRYMSEKDGFKKMFRVQKKLFDEYGPIYKENLFGRTS-VNILYPAESEKVF- 109

Query: 437 NLEGKYPAHILPEPWVLYEK 496
             EGKYP+    + W  Y +
Sbjct: 110 RAEGKYPSRPYVKAWKKYRE 129


>SB_32060| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1162

 Score = 35.1 bits (77), Expect = 0.049
 Identities = 26/82 (31%), Positives = 40/82 (48%)
 Frame = +2

Query: 266 PIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFLNLE 445
           P+ G   D+  AG   +LH+Y+ + HK  GP+    + G   +V ++DPT  K L    +
Sbjct: 49  PVNGNLLDVKKAG---SLHEYLLLLHKTYGPV-ASFMWGTINVVSVADPTLWKELRSLFD 104

Query: 446 GKYPAHILPEPWVLYEKLYGSK 511
                   PE + L+E L G K
Sbjct: 105 RP------PELFKLFEPLIGKK 120


>SB_57426| Best HMM Match : Arteri_nucleo (HMM E-Value=7.6)
          Length = 195

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
 Frame = +3

Query: 69  VAALCSRFIKVVTYIRILFNLKMHRFP-----SMSSIRSAVRSRNSNRCSMSTKPHKSLR 233
           V   CS+ + VV + +++ N  +H +      S SS+ +A + R     S     HK L+
Sbjct: 84  VGVSCSKVVLVVIFHKMVPNHTVHTYAILDKQSDSSLHAAKQERKDKETSPLVDDHKLLK 143

Query: 234 TIDEMPHRNHYQS*EQNLTY 293
            ++   H+N  ++ E  L +
Sbjct: 144 IMEVGIHKNALRNWEMPLPF 163


>SB_19770| Best HMM Match : LRR_1 (HMM E-Value=1.7e-06)
          Length = 239

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +3

Query: 39  NKISFSFPGTVAALCSRFIKVVTYIRILFNLKMHRFPSMSSIRSAVRSRNSNRC 200
           NKIS  F GT+   C R + V     +L  +  H F  +  ++S   SRN   C
Sbjct: 81  NKISPIFEGTITT-CVRLMTVDLSRNLLKRVFKHYFSGLEDLKSVNLSRNVIEC 133


>SB_34557| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 136

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 17/64 (26%), Positives = 30/64 (46%)
 Frame = +2

Query: 266 PIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFLNLE 445
           P IG   ++   GG   LHK + +   ++    Y+   G+   + +SDP  +K + L   
Sbjct: 37  PYIGNLLEVGKYGG---LHK-MQLHFSKIYGRVYKLFIGRAPTIVVSDPEIIKQILLKEF 92

Query: 446 GKYP 457
            K+P
Sbjct: 93  NKFP 96


>SB_26726| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 152

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 17/64 (26%), Positives = 30/64 (46%)
 Frame = +2

Query: 266 PIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFLNLE 445
           P IG   ++   GG   LHK + +   ++    Y+   G+   + +SDP  +K + L   
Sbjct: 53  PYIGNLLEVGKYGG---LHK-MQLHFSKIYGRVYKLFIGRAPTIVVSDPEIIKQILLKEF 108

Query: 446 GKYP 457
            K+P
Sbjct: 109 NKFP 112


>SB_1738| Best HMM Match : p450 (HMM E-Value=0)
          Length = 484

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 17/64 (26%), Positives = 30/64 (46%)
 Frame = +2

Query: 266 PIIGTKFDLFSAGGGKNLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFLNLE 445
           P IG   D+   GG   +HK +    K  G + ++   G+   + +SDP  +K + +   
Sbjct: 37  PYIGNLLDVKKHGG---MHKMLMHYFKAYGRV-HKMFIGRAAAIVVSDPEIVKQIVIKEF 92

Query: 446 GKYP 457
            K+P
Sbjct: 93  HKFP 96


>SB_24421| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 382

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 21/61 (34%), Positives = 27/61 (44%)
 Frame = +2

Query: 446 GKYPAHILPEPWVLYEKLYGSKEDFSLWTERIGWINRRIMNKHLPQRRFRCMVTEPPIRT 625
           G    HI P P V Y   YG     +L   +   + RR + KH   R F  M+T P I+ 
Sbjct: 304 GMVVPHIRPSPLVTYSSCYG-----ALPNGKARHLLRRSVAKHKSARTFFVMIT-PEIKV 357

Query: 626 A 628
           A
Sbjct: 358 A 358


>SB_1760| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 199

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +1

Query: 451 ISGT--YSTRTVGTXXXXXXXXXGLFFMDGEDWLD*STNYEQTSTS 582
           +SGT  Y+T T GT         G +F DG  WL  +T   QTSTS
Sbjct: 51  LSGTMVYNTATAGTSPNNVIP--GFYFWDGSKWLRVTT---QTSTS 91


>SB_39637| Best HMM Match : SAA (HMM E-Value=5.5)
          Length = 195

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = +2

Query: 407 DPTHMKSLFLNLEGKYPAHILPEPWVLYEKLYGSKED 517
           DP +    F  L G Y A I    W LY      ++D
Sbjct: 114 DPRYSNDTFQTLRGNYSASISAGAWTLYSMKNSDEQD 150


>SB_29730| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4275

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 444  KENIRHIFYQNRGYYMKNYTDQKRTFLYGRRGL 542
            K++++HIFY  +G +    T  +R +LY  RGL
Sbjct: 1137 KKSLKHIFYGEKGKFPLKGTYTER-YLYEMRGL 1168


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,677,146
Number of Sequences: 59808
Number of extensions: 440047
Number of successful extensions: 1006
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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