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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0864
         (638 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   6.2  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   6.2  
AY341217-1|AAR13781.1|  200|Anopheles gambiae SRPN10 protein.          23   8.2  
AY341216-1|AAR13780.1|  200|Anopheles gambiae SRPN10 protein.          23   8.2  
AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    23   8.2  
AF043442-1|AAC05667.1|  231|Anopheles gambiae putative pupal-spe...    23   8.2  
AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...    23   8.2  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   8.2  
AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    23   8.2  
AF043438-1|AAC05663.1|  231|Anopheles gambiae putative pupal-spe...    23   8.2  
AF043437-1|AAC05662.1|  239|Anopheles gambiae putative pupal-spe...    23   8.2  
AF043436-1|AAC05661.1|  263|Anopheles gambiae putative pupal-spe...    23   8.2  
AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific cut...    23   8.2  
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    23   8.2  
AF043433-3|AAC05658.1|  231|Anopheles gambiae putative pupal-spe...    23   8.2  
AF043433-2|AAC05657.1|  239|Anopheles gambiae putative pupal-spe...    23   8.2  
AF043433-1|AAC05656.1|  231|Anopheles gambiae putative pupal-spe...    23   8.2  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   8.2  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +2

Query: 317 LHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFLNLEGKYP 457
           L +YI++R+K+   I    L G     F+S     ++L   L+ ++P
Sbjct: 546 LGQYIEVRNKKWSGIVETALGGCLSAFFVSTQEDWRTLDALLKREFP 592


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +1

Query: 295 FCRWRKKLTQIYRHASQAIRTYILREINRKDKTCL 399
           F R R  ++ I R         + R  N +DK CL
Sbjct: 605 FRRGRSTISAIQRVVDAGTAAKLFRRTNTRDKRCL 639


>AY341217-1|AAR13781.1|  200|Anopheles gambiae SRPN10 protein.
          Length = 200

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 7/30 (23%), Positives = 15/30 (50%)
 Frame = -1

Query: 128 IKEDPDISNHFNKPRTQCGNGSWKTKRDFI 39
           +   P+I+NH ++P+    + S      F+
Sbjct: 29  LSTQPEITNHLDRPKVTMADNSSSLDAQFV 58


>AY341216-1|AAR13780.1|  200|Anopheles gambiae SRPN10 protein.
          Length = 200

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 7/30 (23%), Positives = 15/30 (50%)
 Frame = -1

Query: 128 IKEDPDISNHFNKPRTQCGNGSWKTKRDFI 39
           +   P+I+NH ++P+    + S      F+
Sbjct: 29  LSTQPEITNHLDRPKVTMADNSSSLDAQFV 58


>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 564 IIRRLIQPILSVHKEKSSFDPYNFSYSTH 478
           I++ + QP +    E  +   Y FSYS H
Sbjct: 71  IVKTIAQPTIIKSVEHHAPANYEFSYSVH 99


>AF043442-1|AAC05667.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 231

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 564 IIRRLIQPILSVHKEKSSFDPYNFSYSTH 478
           I++ + QP +    E  +   Y FSYS H
Sbjct: 63  IVKTIAQPTIIKSVEHHAPANYEFSYSVH 91


>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 564 IIRRLIQPILSVHKEKSSFDPYNFSYSTH 478
           I++ + QP +    E  +   Y FSYS H
Sbjct: 63  IVKTIAQPTIIKSVEHHAPANYEFSYSVH 91


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 564 IIRRLIQPILSVHKEKSSFDPYNFSYSTH 478
           I++ + QP +    E  +   Y FSYS H
Sbjct: 63  IVKTIAQPTIIKSVEHHAPANYEFSYSVH 91


>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 564 IIRRLIQPILSVHKEKSSFDPYNFSYSTH 478
           I++ + QP +    E  +   Y FSYS H
Sbjct: 71  IVKTIAQPTIIKSVEHHAPANYEFSYSVH 99


>AF043438-1|AAC05663.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 564 IIRRLIQPILSVHKEKSSFDPYNFSYSTH 478
           I++ + QP +    E  +   Y FSYS H
Sbjct: 63  IVKTIAQPTIIKSVEHHAPANYEFSYSVH 91


>AF043437-1|AAC05662.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 564 IIRRLIQPILSVHKEKSSFDPYNFSYSTH 478
           I++ + QP +    E  +   Y FSYS H
Sbjct: 71  IVKTIAQPTIIKSVEHHAPANYEFSYSVH 99


>AF043436-1|AAC05661.1|  263|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 263

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 564 IIRRLIQPILSVHKEKSSFDPYNFSYSTH 478
           I++ + QP +    E  +   Y FSYS H
Sbjct: 95  IVKTIAQPTIIKSVEHHAPANYEFSYSVH 123


>AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific
           cuticular protein CP2b protein.
          Length = 231

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 564 IIRRLIQPILSVHKEKSSFDPYNFSYSTH 478
           I++ + QP +    E  +   Y FSYS H
Sbjct: 63  IVKTIAQPTIIKSVEHHAPANYEFSYSVH 91


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 564 IIRRLIQPILSVHKEKSSFDPYNFSYSTH 478
           I++ + QP +    E  +   Y FSYS H
Sbjct: 71  IVKTIAQPTIIKSVEHHAPANYEFSYSVH 99


>AF043433-3|AAC05658.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 564 IIRRLIQPILSVHKEKSSFDPYNFSYSTH 478
           I++ + QP +    E  +   Y FSYS H
Sbjct: 63  IVKTIAQPTIIKSVEHHAPANYEFSYSVH 91


>AF043433-2|AAC05657.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 239

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 564 IIRRLIQPILSVHKEKSSFDPYNFSYSTH 478
           I++ + QP +    E  +   Y FSYS H
Sbjct: 71  IVKTIAQPTIIKSVEHHAPANYEFSYSVH 99


>AF043433-1|AAC05656.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 564 IIRRLIQPILSVHKEKSSFDPYNFSYSTH 478
           I++ + QP +    E  +   Y FSYS H
Sbjct: 63  IVKTIAQPTIIKSVEHHAPANYEFSYSVH 91


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +1

Query: 295 FCRWRKKLTQIYRHASQAIRTYILREINRKDKTCL 399
           F R R   + I R      R    R  N +DK CL
Sbjct: 544 FRRGRSTFSAIQRVVDAGRRAKSFRRTNHRDKRCL 578


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,576
Number of Sequences: 2352
Number of extensions: 14277
Number of successful extensions: 49
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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