Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0864
         (638 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical p...    29   2.8  
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z75713-5|CAB00054.1|  598|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U41025-2|AAM51507.2|  356|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U41025-1|AAM51508.1|  407|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z81472-3|CAB03888.2|  468|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z73909-2|CAD36493.1|  921|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z73909-1|CAA98133.2| 1009|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z73907-2|CAA98125.2| 1009|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z73906-15|CAD36486.1|  921|Caenorhabditis elegans Hypothetical p...    28   6.5  
Z73906-14|CAA98122.2| 1009|Caenorhabditis elegans Hypothetical p...    28   6.5  
Z50742-2|CAA90616.1|  491|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AF324832-1|AAL82897.1| 1009|Caenorhabditis elegans AEX-1 protein.      28   6.5  
Z92782-6|CAB07191.1|  319|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical protein
            C18D4.2b protein.
          Length = 1376

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +3

Query: 132  KMHRFPSMSSIRSAVRSRNSNRCSMSTKPHKSLRTIDEMPHRNHYQS 272
            K H   SM+++ SA  SRN++  S    P     + D   H+ H+Q+
Sbjct: 1277 KFHMLLSMAAVHSAFDSRNTS--STEAVPDNDPDSEDSRRHKEHFQN 1321


>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical protein
            C18D4.2a protein.
          Length = 1817

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +3

Query: 132  KMHRFPSMSSIRSAVRSRNSNRCSMSTKPHKSLRTIDEMPHRNHYQS 272
            K H   SM+++ SA  SRN++  S    P     + D   H+ H+Q+
Sbjct: 1277 KFHMLLSMAAVHSAFDSRNTS--STEAVPDNDPDSEDSRRHKEHFQN 1321


>Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical
            protein C18D4.2b protein.
          Length = 1376

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +3

Query: 132  KMHRFPSMSSIRSAVRSRNSNRCSMSTKPHKSLRTIDEMPHRNHYQS 272
            K H   SM+++ SA  SRN++  S    P     + D   H+ H+Q+
Sbjct: 1277 KFHMLLSMAAVHSAFDSRNTS--STEAVPDNDPDSEDSRRHKEHFQN 1321


>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical protein
            C18D4.2a protein.
          Length = 1817

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +3

Query: 132  KMHRFPSMSSIRSAVRSRNSNRCSMSTKPHKSLRTIDEMPHRNHYQS 272
            K H   SM+++ SA  SRN++  S    P     + D   H+ H+Q+
Sbjct: 1277 KFHMLLSMAAVHSAFDSRNTS--STEAVPDNDPDSEDSRRHKEHFQN 1321


>Z75713-5|CAB00054.1|  598|Caenorhabditis elegans Hypothetical
           protein T01G9.4 protein.
          Length = 598

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 479 WVLYEKLYGSKEDFSLWTERIGWINR 556
           W LYEKL+  + D S+  + I W N+
Sbjct: 110 WSLYEKLWFGRGDSSICADLISWANQ 135


>U41025-2|AAM51507.2|  356|Caenorhabditis elegans Hypothetical
           protein C01C4.3a protein.
          Length = 356

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -3

Query: 318 KFFPPPAENKSNFVPMIGNDFYVASHLWYVEIYEA*LTLNIDYCY 184
           KFFP P   +++FV      F+++ H   ++ YE     + D  Y
Sbjct: 42  KFFPRPQTKQADFVREYNYSFFLSPHQNIIDTYEGMFQSSDDTAY 86


>U41025-1|AAM51508.1|  407|Caenorhabditis elegans Hypothetical
           protein C01C4.3b protein.
          Length = 407

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -3

Query: 318 KFFPPPAENKSNFVPMIGNDFYVASHLWYVEIYEA*LTLNIDYCY 184
           KFFP P   +++FV      F+++ H   ++ YE     + D  Y
Sbjct: 155 KFFPRPQTKQADFVREYNYSFFLSPHQNIIDTYEGMFQSSDDTAY 199


>Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical
           protein F59F3.5 protein.
          Length = 1199

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 291 KSNFVPMIGNDFYVASHLWYV 229
           KSN VP +GN++ +  HL Y+
Sbjct: 218 KSNDVPYVGNNYSITCHLVYI 238


>Z81472-3|CAB03888.2|  468|Caenorhabditis elegans Hypothetical
           protein C16D6.2 protein.
          Length = 468

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +2

Query: 356 PIFYERLTGKTKLVFISDPTHMKSLFLNLEGKYPAHILPEPWVLYEKLYGS 508
           P+ Y  L  + +  FI    H     LNLEG   + +L  P +     YGS
Sbjct: 310 PLLYAVLNLQLRAAFIDLMPHWLRRHLNLEGDNSSPLLNHPTMTITNKYGS 360


>Z73909-2|CAD36493.1|  921|Caenorhabditis elegans Hypothetical
           protein D2030.10b protein.
          Length = 921

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 157 LPLDRLLGVVTVIDVQCQLSLINLYVP 237
           L LD+ L     I ++CQL L+NL +P
Sbjct: 407 LKLDKYLAESIQISLKCQLDLLNLRIP 433


>Z73909-1|CAA98133.2| 1009|Caenorhabditis elegans Hypothetical
           protein D2030.10a protein.
          Length = 1009

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 157 LPLDRLLGVVTVIDVQCQLSLINLYVP 237
           L LD+ L     I ++CQL L+NL +P
Sbjct: 407 LKLDKYLAESIQISLKCQLDLLNLRIP 433


>Z73907-2|CAA98125.2| 1009|Caenorhabditis elegans Hypothetical
           protein D2030.10a protein.
          Length = 1009

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 157 LPLDRLLGVVTVIDVQCQLSLINLYVP 237
           L LD+ L     I ++CQL L+NL +P
Sbjct: 407 LKLDKYLAESIQISLKCQLDLLNLRIP 433


>Z73906-15|CAD36486.1|  921|Caenorhabditis elegans Hypothetical
           protein D2030.10b protein.
          Length = 921

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 157 LPLDRLLGVVTVIDVQCQLSLINLYVP 237
           L LD+ L     I ++CQL L+NL +P
Sbjct: 407 LKLDKYLAESIQISLKCQLDLLNLRIP 433


>Z73906-14|CAA98122.2| 1009|Caenorhabditis elegans Hypothetical
           protein D2030.10a protein.
          Length = 1009

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 157 LPLDRLLGVVTVIDVQCQLSLINLYVP 237
           L LD+ L     I ++CQL L+NL +P
Sbjct: 407 LKLDKYLAESIQISLKCQLDLLNLRIP 433


>Z50742-2|CAA90616.1|  491|Caenorhabditis elegans Hypothetical
           protein K09A11.2 protein.
          Length = 491

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +2

Query: 314 NLHKYIDMRHKQLGPIFYERLTGKTKLVFISDPTHMKSLFLNLEG---KYPAHILPE 475
           N+ KY D+  K  GP F   +      + ++D  H+K  F+N +G    Y AH  PE
Sbjct: 46  NVQKYFDVLSKTYGPCF--TIWIPFPAIVLTDYEHIKDAFVN-QGDTFTYRAHRSPE 99


>AF324832-1|AAL82897.1| 1009|Caenorhabditis elegans AEX-1 protein.
          Length = 1009

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 157 LPLDRLLGVVTVIDVQCQLSLINLYVP 237
           L LD+ L     I ++CQL L+NL +P
Sbjct: 407 LKLDKYLAESIQISLKCQLDLLNLRIP 433


>Z92782-6|CAB07191.1|  319|Caenorhabditis elegans Hypothetical
           protein F14F8.7 protein.
          Length = 319

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 509 LIRIIFHIVPTVLVEYVPDIFLLNLRINFSCEL 411
           L  +IF +  TVL E++P I LL   I    EL
Sbjct: 214 LFYLIFFLTETVLFEFIPSILLLITTICLIIEL 246


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,736,129
Number of Sequences: 27780
Number of extensions: 347083
Number of successful extensions: 835
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)