Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0863
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       25   0.75 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   0.99 
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    24   0.99 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.3  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.2  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +2

Query: 524 GEYTLLEAD-GSVRKVEYTAD 583
           GEY ++  D GS+R V YTAD
Sbjct: 218 GEYGVVSHDDGSLRGVRYTAD 238


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
 Frame = -1

Query: 458 GVSEVVFRVSIFFF---MVAGDKYFV 390
           GVS VV  ++IFFF   + AG+ YF+
Sbjct: 532 GVSFVVIVITIFFFTANVQAGELYFM 557


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
 Frame = -1

Query: 458 GVSEVVFRVSIFFF---MVAGDKYFV 390
           GVS VV  ++IFFF   + AG+ YF+
Sbjct: 257 GVSFVVIVITIFFFTANVQAGELYFM 282


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 77   CGSGKRPAVATASTMLKAT 21
            CG GK P + T +  L+ T
Sbjct: 2672 CGCGKHPLLKTLNNELRGT 2690


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 519 CTANTPCWKL 548
           CTA+T CW++
Sbjct: 528 CTASTRCWEV 537


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 174 SYWSGCYIFGGMEMWLVVTD 115
           SY    +I+G M M + +TD
Sbjct: 44  SYGRENFIYGSMNMTVAITD 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,458
Number of Sequences: 336
Number of extensions: 1690
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)