Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0863
         (671 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          25   0.50 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      25   0.50 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   2.6  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   2.6  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   2.6  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   3.5  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   3.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.1  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 450 AYSVADGHSGDNKSQHESREATLCTANTPCWKLT 551
           AY++A G + D K  + + +  L  AN   W LT
Sbjct: 177 AYNIAMGDTADMKKTYNNIDYYLLAANYTGWYLT 210


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 450 AYSVADGHSGDNKSQHESREATLCTANTPCWKLT 551
           AY++A G + D K  + + +  L  AN   W LT
Sbjct: 177 AYNIAMGDTADMKKTYNNIDYYLLAANYTGWYLT 210


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 452 SEVVFRVSIFFFMVAGDKYFVGWSDH 375
           ++VV +  + FF + GD     W++H
Sbjct: 308 AKVVSKSGVLFFGLVGDSALGCWNEH 333


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 452 SEVVFRVSIFFFMVAGDKYFVGWSDH 375
           ++VV +  + FF + GD     W++H
Sbjct: 308 AKVVSKSGVLFFGLVGDSALGCWNEH 333


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 452 SEVVFRVSIFFFMVAGDKYFVGWSDH 375
           ++VV +  + FF + GD     W++H
Sbjct: 308 AKVVSKSGVLFFGLVGDSALGCWNEH 333


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 12/51 (23%), Positives = 20/51 (39%)
 Frame = +3

Query: 384 PAHKVLVAGHHEEEYAHPKYDFAYSVADGHSGDNKSQHESREATLCTANTP 536
           P H  +  GH    +A P +  +++    H       H S  A +   +TP
Sbjct: 414 PHHHTMGHGH-SHIHATPHHHHSHAATPHHQHSTPLAHSSYPAAIQIGHTP 463


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +2

Query: 491 SARVPRGDAVHGEYTLLEADGSVRKVEYTADDHHGF 598
           +AR+P G+    +   L  D    + +  +DD  G+
Sbjct: 666 TARLPNGEGTRADICQLLKDSQYIREQTESDDKEGY 701


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 408  GHHEEEYAHPKYDFAYSVADGHSG 479
            G+ E   ++P Y+F+    DG  G
Sbjct: 1045 GYRETSSSNPSYNFSSVSGDGEEG 1068


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 408  GHHEEEYAHPKYDFAYSVADGHSG 479
            G+ E   ++P Y+F+    DG  G
Sbjct: 1041 GYRETSSSNPSYNFSSVSGDGEEG 1064


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 427 YSSSWWPATSTL 392
           YS++ WPATS +
Sbjct: 776 YSTTRWPATSVI 787



 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -1

Query: 98  TAAADE*CGSGKRPAVATASTMLKATILANIL 3
           +AAA     +  RPA +TA+T++ +   +N++
Sbjct: 831 SAAATSSTSTSPRPASSTAATLVLSGCPSNMM 862


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,778
Number of Sequences: 438
Number of extensions: 1815
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)