Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0862
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    24   0.90 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.7  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   8.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.4  

>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 0.90
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 505 VPIFSNEICT*QMLTFDFHG 446
           VP  SN +    ++T+DFHG
Sbjct: 186 VPAMSNVLDVINVMTYDFHG 205


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 505  VPIFSNEICT*QMLTFDFHGE 443
            VP+ +  +    ++T+DFHG+
Sbjct: 1575 VPVLAQNLDWVAVMTYDFHGQ 1595


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 505 VPIFSNEICT*QMLTFDFH 449
           +P  SN +    ++T+DFH
Sbjct: 187 IPAMSNVLDIINVMTYDFH 205


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 505 VPIFSNEICT*QMLTFDFHGE 443
           VP  S  +    ++T+DFHG+
Sbjct: 693 VPEISKYLDFINVMTYDFHGQ 713


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,873
Number of Sequences: 336
Number of extensions: 3632
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)