BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0862 (623 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p pro... 28 8.9 AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night... 28 8.9 AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-P... 28 8.9 AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-P... 28 8.9 AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-P... 28 8.9 AB028498-1|BAA84069.1| 3575|Drosophila melanogaster Flamingo pro... 28 8.9 >AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p protein. Length = 1688 Score = 28.3 bits (60), Expect = 8.9 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = +3 Query: 228 KRKCTTTLRISSKVSVSYNGRPALQTETHYCFTVQIGRVVVPTRA 362 +R C +R S+V +S ++ +CF GR+ PTRA Sbjct: 1400 RRICNNCVRRQSRV-ISQCNCEGVEKRRDFCFNSHKGRIACPTRA 1443 >AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night protein protein. Length = 3579 Score = 28.3 bits (60), Expect = 8.9 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -2 Query: 370 CESARVGTTTRPICTVKQ*CVSV*RAGRPL 281 C+S VGT PICTV+ V RA L Sbjct: 1990 CDSGYVGTDCAPICTVRPCASGVCRANTSL 2019 >AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-PA, isoform A protein. Length = 1537 Score = 28.3 bits (60), Expect = 8.9 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = +3 Query: 228 KRKCTTTLRISSKVSVSYNGRPALQTETHYCFTVQIGRVVVPTRA 362 +R C +R S+V +S ++ +CF GR+ PTRA Sbjct: 1249 RRICNNCVRRQSRV-ISQCNCEGVEKRRDFCFNSHKGRIACPTRA 1292 >AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-PB, isoform B protein. Length = 1688 Score = 28.3 bits (60), Expect = 8.9 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = +3 Query: 228 KRKCTTTLRISSKVSVSYNGRPALQTETHYCFTVQIGRVVVPTRA 362 +R C +R S+V +S ++ +CF GR+ PTRA Sbjct: 1400 RRICNNCVRRQSRV-ISQCNCEGVEKRRDFCFNSHKGRIACPTRA 1443 >AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-PA protein. Length = 3574 Score = 28.3 bits (60), Expect = 8.9 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -2 Query: 370 CESARVGTTTRPICTVKQ*CVSV*RAGRPL 281 C+S VGT PICTV+ V RA L Sbjct: 1990 CDSGYVGTDCAPICTVRPCASGVCRANTSL 2019 >AB028498-1|BAA84069.1| 3575|Drosophila melanogaster Flamingo protein. Length = 3575 Score = 28.3 bits (60), Expect = 8.9 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -2 Query: 370 CESARVGTTTRPICTVKQ*CVSV*RAGRPL 281 C+S VGT PICTV+ V RA L Sbjct: 1991 CDSGYVGTDCAPICTVRPCASGVCRANTSL 2020 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 29,004,716 Number of Sequences: 53049 Number of extensions: 628804 Number of successful extensions: 1313 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1281 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1313 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2579793750 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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