Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0860
         (665 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    23   1.7  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   1.7  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    22   5.2  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   5.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.9  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   9.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.1  

>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 591 EEQSKCPRPKGTKFISILEIDYLN*RLC 508
           + + K P+   +K+ SIL I   N RLC
Sbjct: 10  KSRQKAPKIVNSKYNSILNIALKNFRLC 37


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 591 EEQSKCPRPKGTKFISILEIDYLN*RLC 508
           + + K P+   +K+ SIL I   N RLC
Sbjct: 10  KSRQKAPKIVNSKYNSILNIALKNFRLC 37


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -1

Query: 623 LDEENEY*SGMKNSRSVLGRKEPN 552
           LDEEN+   G     S L  K PN
Sbjct: 71  LDEENDINQGGLKRVSALKEKNPN 94


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 588 LHPALIFIFFVQLPFQWESTPTSS 659
           LHP++  +   Q PF W S   SS
Sbjct: 69  LHPSVPRLGHPQWPFAWGSLXRSS 92


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 414 TSRSLTYFFNRYFGYRRPFFNND 346
           +S S  YF N+ + +    F ND
Sbjct: 564 SSNSSNYFANKTYDFHNMSFEND 586


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +3

Query: 396 MLVIAMLLIPKL*SIIRYIKRIRFLIKPYRFGVLKKKNTIVNLNSRFQV 542
           + V+  L+ P   SII Y + I   I   +  V     TIVN  S + V
Sbjct: 33  LCVVTALVTPSALSIIYYRQPIYAKISETKSIVAMVMGTIVNAFSCYTV 81


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 296 IFVCKFECVRNSANLNY 246
           I + +FE  +NS N+N+
Sbjct: 344 IVMIQFEMTQNSTNINF 360


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,585
Number of Sequences: 336
Number of extensions: 3495
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)