Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0860
(665 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating... 26 0.37
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 25 0.86
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 23 2.6
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 4.6
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 4.6
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 6.0
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 6.0
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 6.0
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 6.0
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 22 6.0
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 21 8.0
>S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating
peptide protein.
Length = 50
Score = 25.8 bits (54), Expect = 0.37
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +3
Query: 117 TSYILILISVKDYFII-TMRFKCTCK 191
T + L +I + YF+ TM KC CK
Sbjct: 8 TFFFLSVILITSYFVTPTMSIKCNCK 33
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 24.6 bits (51), Expect = 0.86
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = +3
Query: 435 SIIRYIKRIRFLIKPYRFGVLKKKNTIVNLNSRFQVSI*IWFLSAE 572
S + +I ++ + Y F V+K + N++ ++Q +FL++E
Sbjct: 86 SFLLFILLVQIAVAVYAFIVVKNDDNFRNISEKYQEIFNGYFLNSE 131
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +2
Query: 548 MNLVPFGRGHFDCSSSRFNIH 610
M+ +PFG G +C +RF ++
Sbjct: 432 MHYLPFGDGPRNCIGARFAVY 452
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 4.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 617 EENEY*SGMKNSRSVLGRKEPNSYRYLKST 528
E N Y SG R+V G+++ Y Y ST
Sbjct: 367 ETNRYSSGRVLMRTVRGKEKTCYYPYHPST 396
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 4.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 617 EENEY*SGMKNSRSVLGRKEPNSYRYLKST 528
E N Y SG R+V G+++ Y Y ST
Sbjct: 367 ETNRYSSGRVLMRTVRGKEKTCYYPYHPST 396
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 203 ANNAEFSRDPDDDSNNLNLHCYAHIQTYIQKY 298
+NN ++S + ++NN N + Y +Q Y Y
Sbjct: 86 SNNYKYSNYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 203 ANNAEFSRDPDDDSNNLNLHCYAHIQTYIQKY 298
+NN ++S + ++NN N + Y +Q Y Y
Sbjct: 86 SNNYKYSNYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 203 ANNAEFSRDPDDDSNNLNLHCYAHIQTYIQKY 298
+NN ++S + ++NN N + Y +Q Y Y
Sbjct: 86 SNNYKYSNYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 203 ANNAEFSRDPDDDSNNLNLHCYAHIQTYIQKY 298
+NN ++S + ++NN N + Y +Q Y Y
Sbjct: 86 SNNYKYSNYNNYNNNNYNNNNYKKLQYYNINY 117
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.8 bits (44), Expect = 6.0
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 389 KKYVSDRDVVNTQTLIDNSIHKTYSIFNKT 478
K Y+ RD T DNS +S NKT
Sbjct: 413 KYYLKSRDPERTPYQWDNSTSAGFSQTNKT 442
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 21.4 bits (43), Expect = 8.0
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +2
Query: 572 GHFDCSSSRFNIHFLRPTP 628
GH +C SS+F + P
Sbjct: 63 GHINCDSSKFEEDLMNKLP 81
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,450
Number of Sequences: 438
Number of extensions: 4633
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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