Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0858
         (605 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g29650.2 68415.m03604 inorganic phosphate transporter, putati...    29   3.2  
At2g29650.1 68415.m03603 inorganic phosphate transporter, putati...    29   3.2  
At2g40860.1 68415.m05044 protein kinase family protein / protein...    27   9.6  
At2g32940.1 68415.m04038 PAZ domain-containing protein / piwi do...    27   9.6  

>At2g29650.2 68415.m03604 inorganic phosphate transporter, putative
           similar to brain specific Na+-dependent inorganic
           phosphate cotransporter [Rattus norvegicus] GI:507415;
           contains Pfam profile PF00083: major facilitator
           superfamily protein
          Length = 398

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 152 NYRGLLRNLQLYYLYTSNRT*N*YFYSKELRSY-PSPTTPNIFFY 283
           N R LL +  ++ LYTSNR       S+ LR+  PSP +  ++ Y
Sbjct: 2   NARALLCSSNIHSLYTSNRPPEKTSSSRSLRNLKPSPKSLRVWIY 46


>At2g29650.1 68415.m03603 inorganic phosphate transporter, putative
           similar to brain specific Na+-dependent inorganic
           phosphate cotransporter [Rattus norvegicus] GI:507415;
           contains Pfam profile PF00083: major facilitator
           superfamily protein
          Length = 512

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 152 NYRGLLRNLQLYYLYTSNRT*N*YFYSKELRSY-PSPTTPNIFFY 283
           N R LL +  ++ LYTSNR       S+ LR+  PSP +  ++ Y
Sbjct: 2   NARALLCSSNIHSLYTSNRPPEKTSSSRSLRNLKPSPKSLRVWIY 46


>At2g40860.1 68415.m05044 protein kinase family protein / protein
           phosphatase 2C ( PP2C) family protein contains Pfam
           PF00481: Protein phosphatase 2C domain; contains Pfam
           PF00069: Protein kinase domain; similar to partner of
           PIX 1 (GI:21702695) [Homo sapiens]
          Length = 658

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = -3

Query: 531 LFAITPAGKGGCAARRLSWVTPGFSQSRRCKTTASE 424
           LFAI    +G  AA   + V PG  QS  C T+A E
Sbjct: 423 LFAIFDGHRGAAAAEFSAQVLPGLVQS-LCSTSAGE 457


>At2g32940.1 68415.m04038 PAZ domain-containing protein / piwi
           domain-containing protein similar to SP|O04379 Argonaute
           protein (AGO1) {Arabidopsis thaliana}, SP|Q9XGW1 PINHEAD
           protein (ZWILLE protein) {Arabidopsis thaliana};
           contains Pfam profiles PF02171: Piwi domain, PF02170:
           PAZ domain
          Length = 878

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 387 GPPLEVGGGIYVVEGLHN 334
           G P++VGGG+  + GLH+
Sbjct: 217 GHPMKVGGGVIGIRGLHS 234


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,056,227
Number of Sequences: 28952
Number of extensions: 301460
Number of successful extensions: 672
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1206913392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)