BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0857 (637 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_01_0465 - 3304417-3306834 32 0.33 12_01_0199 - 1467137-1467172,1467302-1467391,1468304-1468396,146... 31 0.77 11_01_0194 + 1539847-1541533,1541650-1541730,1541773-1542335 31 0.77 12_01_0198 - 1461305-1463812 31 1.0 11_01_0192 - 1523572-1526097 31 1.0 03_04_0116 + 17406702-17409008,17409385-17409501,17409502-17409561 31 1.0 01_06_0195 + 27379266-27379300,27379870-27382174 31 1.0 01_06_0414 + 29182350-29183812,29184211-29184346 30 1.8 06_01_0889 - 6807449-6809257 28 5.4 10_08_0646 + 19572642-19572792,19572973-19573117,19573207-195733... 27 9.4 >06_01_0465 - 3304417-3306834 Length = 805 Score = 32.3 bits (70), Expect = 0.33 Identities = 13/43 (30%), Positives = 23/43 (53%) Frame = +2 Query: 350 FEKLTDVDFSGTAYYTVRNLSLYECQGWCREEPDCQAASFRCG 478 F+K+ DF G + ++L++C+ C + DCQA + G Sbjct: 351 FKKIPHTDFYGYDLNYSKPVTLWQCKRMCLDNADCQAFEYHKG 393 >12_01_0199 - 1467137-1467172,1467302-1467391,1468304-1468396, 1468488-1469515,1470005-1470552,1470656-1470695, 1473774-1475196 Length = 1085 Score = 31.1 bits (67), Expect = 0.77 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = +2 Query: 359 LTDVDFSGTAYYTVRNLSLYECQGWCREEPDCQAASFRCGE 481 L DF G + NLSL EC C EP C ++ G+ Sbjct: 357 LPHTDFWGFDINSSENLSLDECSTRCMSEPSCVVFQYKQGK 397 >11_01_0194 + 1539847-1541533,1541650-1541730,1541773-1542335 Length = 776 Score = 31.1 bits (67), Expect = 0.77 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = +2 Query: 359 LTDVDFSGTAYYTVRNLSLYECQGWCREEPDCQAASFRCGE 481 L DF G + NLSL EC C EP C ++ G+ Sbjct: 365 LPHTDFWGFDINSSENLSLDECSTRCMSEPSCVVFQYKQGK 405 >12_01_0198 - 1461305-1463812 Length = 835 Score = 30.7 bits (66), Expect = 1.0 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = +2 Query: 359 LTDVDFSGTAYYTVRNLSLYECQGWCREEPDCQAASFRCG 478 L DF G + +LSL+EC C EP C ++ G Sbjct: 359 LPHTDFWGFDINSSAHLSLHECTARCMSEPSCVVFEYKQG 398 >11_01_0192 - 1523572-1526097 Length = 841 Score = 30.7 bits (66), Expect = 1.0 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = +2 Query: 359 LTDVDFSGTAYYTVRNLSLYECQGWCREEPDCQAASFRCG 478 L DF G + +LSL+EC C EP C ++ G Sbjct: 361 LPHTDFWGFDINSSAHLSLHECAARCMSEPSCVVFEYKQG 400 >03_04_0116 + 17406702-17409008,17409385-17409501,17409502-17409561 Length = 827 Score = 30.7 bits (66), Expect = 1.0 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = +2 Query: 350 FEKLTDVDFSGTAYYTVRNLSLYECQGWCREEPDCQAASFRCGE 481 F L D DF G+ V ++S C CR + +C+ + GE Sbjct: 337 FVHLPDTDFWGSDQQLVNHVSWQACMNICRSDCNCKGFQYLKGE 380 >01_06_0195 + 27379266-27379300,27379870-27382174 Length = 779 Score = 30.7 bits (66), Expect = 1.0 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +2 Query: 350 FEKLTDVDFSGTAYYTVRNLSLYECQGWCREEPDCQAASFRCG 478 F KL DF G +++SL EC+ C + C A +++ G Sbjct: 327 FFKLAQTDFYGFDLIINQSISLKECKKTCLDICSCSAVTYKTG 369 >01_06_0414 + 29182350-29183812,29184211-29184346 Length = 532 Score = 29.9 bits (64), Expect = 1.8 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 Query: 368 VDFSGTAYYTVRNLSLYECQGWCREEPDCQAASF 469 VD GT V+ L LYE Q + E CQA++F Sbjct: 495 VDSLGTVARNVKVLRLYELQILSKSEEQCQASAF 528 >06_01_0889 - 6807449-6809257 Length = 602 Score = 28.3 bits (60), Expect = 5.4 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = +2 Query: 443 EPDCQAASFRCGELKNK*LREV-ARLVDIIKTI 538 E D +A FRCG L++ RE+ A VD++ I Sbjct: 474 EVDGEACEFRCGNLRHPQAREIYAMAVDMVSRI 506 >10_08_0646 + 19572642-19572792,19572973-19573117,19573207-19573375, 19574160-19574430,19574527-19574789,19574872-19575087, 19575215-19575326,19575382-19575473 Length = 472 Score = 27.5 bits (58), Expect = 9.4 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = -1 Query: 469 EGSRLTIRFLSAPALALV*GQVPHGVIRST 380 EGS T FL PAL+ ++PHG I +T Sbjct: 260 EGSMYTFVFLWTPALSPNDEEIPHGFIFAT 289 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,083,996 Number of Sequences: 37544 Number of extensions: 305680 Number of successful extensions: 608 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 599 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 608 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1561213104 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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