Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0857
         (637 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119115-1|AAM50975.1|  715|Drosophila melanogaster RE15579p pro...    83   2e-16
AE014298-2|ABC67158.1|  715|Drosophila melanogaster CG17131-PB, ...    83   2e-16
AE014298-1|AAZ52488.1|  715|Drosophila melanogaster CG17131-PA, ...    83   2e-16

>AY119115-1|AAM50975.1|  715|Drosophila melanogaster RE15579p
           protein.
          Length = 715

 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = +2

Query: 341 RIAFEKLTDVDFSGTAYYTVRNLSLYECQGWCREEPDCQAASF 469
           R+AFEKLTD DF G  YY+V+NLSLYECQGWCREE DCQAA+F
Sbjct: 37  RMAFEKLTDFDFPGNTYYSVKNLSLYECQGWCREEADCQAAAF 79


>AE014298-2|ABC67158.1|  715|Drosophila melanogaster CG17131-PB,
           isoform B protein.
          Length = 715

 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = +2

Query: 341 RIAFEKLTDVDFSGTAYYTVRNLSLYECQGWCREEPDCQAASF 469
           R+AFEKLTD DF G  YY+V+NLSLYECQGWCREE DCQAA+F
Sbjct: 37  RMAFEKLTDFDFPGNTYYSVKNLSLYECQGWCREEADCQAAAF 79


>AE014298-1|AAZ52488.1|  715|Drosophila melanogaster CG17131-PA,
           isoform A protein.
          Length = 715

 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = +2

Query: 341 RIAFEKLTDVDFSGTAYYTVRNLSLYECQGWCREEPDCQAASF 469
           R+AFEKLTD DF G  YY+V+NLSLYECQGWCREE DCQAA+F
Sbjct: 37  RMAFEKLTDFDFPGNTYYSVKNLSLYECQGWCREEADCQAAAF 79


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,947,139
Number of Sequences: 53049
Number of extensions: 514286
Number of successful extensions: 1078
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)