Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0857
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73911-6|CAL49432.1|   45|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z73911-5|CAL49431.1|  329|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AC024845-7|AAF60849.2|  422|Caenorhabditis elegans Hypothetical ...    29   2.8  

>Z73911-6|CAL49432.1|   45|Caenorhabditis elegans Hypothetical
           protein T12A7.4b protein.
          Length = 45

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 609 WVRAVSRLPISDKKKIQGNFRHMKIVL 529
           W R  S +P SD  KI  N+ HM+  L
Sbjct: 3   WGRPTSEIPFSDSNKIYKNYTHMETKL 29


>Z73911-5|CAL49431.1|  329|Caenorhabditis elegans Hypothetical
           protein T12A7.4a protein.
          Length = 329

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 609 WVRAVSRLPISDKKKIQGNFRHMKIVL 529
           W R  S +P SD  KI  N+ HM+  L
Sbjct: 287 WGRPTSEIPFSDSNKIYKNYTHMETKL 313


>AC024845-7|AAF60849.2|  422|Caenorhabditis elegans Hypothetical
           protein Y65B4BL.1 protein.
          Length = 422

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 10/36 (27%), Positives = 22/36 (61%)
 Frame = -2

Query: 360 SFSNAIRLSTDEACISSNSAKGAKLSALLFMLTVLL 253
           +F N    S+   C SSN++ G   S++L ++++++
Sbjct: 123 AFGNNSSSSSSAGCFSSNNSSGGLFSSILILISIII 158


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,835,761
Number of Sequences: 27780
Number of extensions: 267481
Number of successful extensions: 696
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)