Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0856
         (663 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...   150   3e-35
UniRef50_UPI0000E4A923 Cluster: PREDICTED: similar to angiotensi...    34   2.7  
UniRef50_Q8IQ18 Cluster: CG33196-PB; n=10; Endopterygota|Rep: CG...    33   4.6  
UniRef50_Q54GD5 Cluster: Patatin domain-containing protein; n=1;...    33   8.1  

>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score =  150 bits (363), Expect = 3e-35
 Identities = 72/88 (81%), Positives = 76/88 (86%), Gaps = 2/88 (2%)
 Frame = -2

Query: 326  LTSSRFYHRTARHRSRVHPY*ATA--SSTVRFQRSFLPRTIRLWNELPSTVFPEHYGMSF 153
            + +SRFYHRTARHRSRVHPY      SSTVRFQRSFLPRTIRLWNELPSTVFPE Y MSF
Sbjct: 899  IPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSF 958

Query: 152  FKRGLWIVLNGRQRLGSASGIADVHERR 69
            FKRGLW VL+GRQRLGSA GIA+VH RR
Sbjct: 959  FKRGLWRVLSGRQRLGSAPGIAEVHGRR 986


>UniRef50_UPI0000E4A923 Cluster: PREDICTED: similar to angiotensin
           converting enzyme, partial; n=3; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to angiotensin
           converting enzyme, partial - Strongylocentrotus
           purpuratus
          Length = 926

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 12/19 (63%), Positives = 17/19 (89%)
 Frame = -2

Query: 239 FQRSFLPRTIRLWNELPST 183
           ++ SF PRTIR+WN+LP+T
Sbjct: 884 YKYSFYPRTIRIWNQLPAT 902


>UniRef50_Q8IQ18 Cluster: CG33196-PB; n=10; Endopterygota|Rep:
            CG33196-PB - Drosophila melanogaster (Fruit fly)
          Length = 23015

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
 Frame = -3

Query: 256  RHPQCVSRDLF--CHVPSGFGMSSLPRCFPSTMACPSSNEACG*Y*TVGSGLALPLALLT 83
            ++ +CV ++    CH P GF   S   C    +AC      CG   T    + LP+    
Sbjct: 2914 QNAECVMQNHLKQCHCPEGFTGDSAKECVRVPVACDGE---CGPGYTCRDSMCLPVCHND 2970

Query: 82   SMSDGNHS-PSGGCMLICLYDN 20
                 N     G CML C  DN
Sbjct: 2971 LECASNEKCLKGSCMLTCRVDN 2992


>UniRef50_Q54GD5 Cluster: Patatin domain-containing protein; n=1;
           Dictyostelium discoideum AX4|Rep: Patatin
           domain-containing protein - Dictyostelium discoideum AX4
          Length = 403

 Score = 32.7 bits (71), Expect = 8.1
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = +2

Query: 236 GNALWMTQWLSMDVLYSGDGRCDDKNEMMLTSNLYAVGTAPLAANIDKRSNSIKINFYAI 415
           G   + T WL ++ L+   G CD  NE  L       G   ++  + K +N    N Y  
Sbjct: 16  GTRGYYTVWL-LEKLFQEVG-CDLINESSLVGGTSTGGIIAISKAVGKLNNEALSNLYVG 73

Query: 416 ENAKKL-ASSTLYNVTTL 466
           E+AKK+  SS L N+  +
Sbjct: 74  EDAKKIFVSSYLENIKNI 91


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,306,865
Number of Sequences: 1657284
Number of extensions: 14387676
Number of successful extensions: 35110
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35105
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)