Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0856
         (663 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    27   0.10 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    25   0.42 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.7  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   5.2  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   6.8  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 402 TFTLSRTLKNSHQAHCTTLQHCKWSSFEIRV 494
           ++ L  T  + HQA C  L +C W+S   +V
Sbjct: 128 SYVLMATAIDRHQAICYPLTYCSWTSRRSKV 158


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 430 TRIKHTVQRYNIVNGLVSKYGSLKLRN 510
           +RIKH     ++  G + K+ +LKL+N
Sbjct: 63  SRIKHLEPNLDVNQGNLKKFNALKLKN 89


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = +3

Query: 432  SHQAHCTTLQHCKWSSFEI 488
            ++   CT   HC W  +E+
Sbjct: 1286 AYPGDCTRYLHCLWGKYEV 1304


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 245 VRFQRSFLPRTIRLWNELPST 183
           VRF +     T++LW++L ST
Sbjct: 84  VRFMKYHFFGTLKLWSQLFST 104


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 51  VGVCSSACTTIKKK 10
           VG+  SACT +++K
Sbjct: 374 VGIVGSACTDVEQK 387


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,928
Number of Sequences: 336
Number of extensions: 3694
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)