BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0856 (663 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 33 0.26 AE014134-3155|AAF53840.1| 3781|Drosophila melanogaster CG10631-P... 31 1.4 AY069240-1|AAL39385.1| 494|Drosophila melanogaster GM01519p pro... 28 9.9 AE014296-335|AAF47551.2| 858|Drosophila melanogaster CG7991-PA ... 28 9.9 AE014134-3348|AAF53969.1| 494|Drosophila melanogaster CG9248-PB... 28 9.9 AE014134-3347|AAF53968.1| 494|Drosophila melanogaster CG9248-PA... 28 9.9 >AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB protein. Length = 23015 Score = 33.5 bits (73), Expect = 0.26 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Frame = -3 Query: 256 RHPQCVSRDLF--CHVPSGFGMSSLPRCFPSTMACPSSNEACG*Y*TVGSGLALPLALLT 83 ++ +CV ++ CH P GF S C +AC CG T + LP+ Sbjct: 2914 QNAECVMQNHLKQCHCPEGFTGDSAKECVRVPVACDGE---CGPGYTCRDSMCLPVCHND 2970 Query: 82 SMSDGNHS-PSGGCMLICLYDN 20 N G CML C DN Sbjct: 2971 LECASNEKCLKGSCMLTCRVDN 2992 >AE014134-3155|AAF53840.1| 3781|Drosophila melanogaster CG10631-PA protein. Length = 3781 Score = 31.1 bits (67), Expect = 1.4 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = +3 Query: 165 IVLGKHRGRELIPKPDGTWQKRSLETHCG*RSGLVWMYSTPVTGG 299 ++LG E++P P+ WQK++ E C G +W P G Sbjct: 2677 LMLGHDEEVEMLPNPEILWQKKA-EVCCATACGRIWQPGDPKFSG 2720 >AY069240-1|AAL39385.1| 494|Drosophila melanogaster GM01519p protein. Length = 494 Score = 28.3 bits (60), Expect = 9.9 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -2 Query: 197 ELPSTVFPEHYGMSFFKRGLWIVLNGRQRLGSAS 96 E+ S FP+++G LW+V N LGSA+ Sbjct: 197 EVVSISFPKYFGSGVLHTKLWVVDNKHFYLGSAN 230 >AE014296-335|AAF47551.2| 858|Drosophila melanogaster CG7991-PA protein. Length = 858 Score = 28.3 bits (60), Expect = 9.9 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = +3 Query: 18 LLSYRQMSIHPPDGEWLPSLMDVSNARGRAKPLPT 122 +L ++ + PP E +P+ +DV+ R R K LP+ Sbjct: 298 VLDRKENEVFPPRTEPVPTQLDVTKKRYRVKQLPS 332 >AE014134-3348|AAF53969.1| 494|Drosophila melanogaster CG9248-PB, isoform B protein. Length = 494 Score = 28.3 bits (60), Expect = 9.9 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -2 Query: 197 ELPSTVFPEHYGMSFFKRGLWIVLNGRQRLGSAS 96 E+ S FP+++G LW+V N LGSA+ Sbjct: 197 EVVSISFPKYFGSGVLHTKLWVVDNKHFYLGSAN 230 >AE014134-3347|AAF53968.1| 494|Drosophila melanogaster CG9248-PA, isoform A protein. Length = 494 Score = 28.3 bits (60), Expect = 9.9 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -2 Query: 197 ELPSTVFPEHYGMSFFKRGLWIVLNGRQRLGSAS 96 E+ S FP+++G LW+V N LGSA+ Sbjct: 197 EVVSISFPKYFGSGVLHTKLWVVDNKHFYLGSAN 230 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 30,806,426 Number of Sequences: 53049 Number of extensions: 683973 Number of successful extensions: 1757 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1706 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1756 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2848092300 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -