BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0856 (663 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 22 4.5 DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 4.5 AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 4.5 DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 21 7.9 DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 7.9 DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 7.9 AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 7.9 >DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large subunit protein. Length = 296 Score = 22.2 bits (45), Expect = 4.5 Identities = 11/33 (33%), Positives = 16/33 (48%) Frame = -3 Query: 565 PDYTREVGEEGSMPTFMLCFLALGTRISKLDHL 467 P T+ + E G + +LC LGT L H+ Sbjct: 84 PGDTKVMVEHGELVMGILCKKTLGTSAGSLLHI 116 >DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine receptor beta1subunit protein. Length = 520 Score = 22.2 bits (45), Expect = 4.5 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +3 Query: 48 PPDGEWLPSLMDVSNARG 101 PPD W P ++ +NA G Sbjct: 104 PPDKVWKPDIVLFNNADG 121 >AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor protein. Length = 587 Score = 22.2 bits (45), Expect = 4.5 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +2 Query: 206 AGWYVAKKISGNALWMTQWLSMDV 277 A W V K LW + WL++DV Sbjct: 123 ATWEVFKVWIFGDLWCSIWLAVDV 146 >DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein protein. Length = 424 Score = 21.4 bits (43), Expect = 7.9 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = -2 Query: 374 LCLPLGALFQLHTNLRLTSSRF 309 +C P +F LH N +T RF Sbjct: 147 ICRPKIHVFSLHDNKLITMYRF 168 >DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase isoform B protein. Length = 931 Score = 21.4 bits (43), Expect = 7.9 Identities = 7/15 (46%), Positives = 11/15 (73%) Frame = +3 Query: 231 SLETHCG*RSGLVWM 275 S + +CG R+GL W+ Sbjct: 683 SRDLYCGIRAGLSWL 697 >DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase isoform A protein. Length = 969 Score = 21.4 bits (43), Expect = 7.9 Identities = 7/15 (46%), Positives = 11/15 (73%) Frame = +3 Query: 231 SLETHCG*RSGLVWM 275 S + +CG R+GL W+ Sbjct: 721 SRDLYCGIRAGLSWL 735 >AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type D2 protein. Length = 456 Score = 21.4 bits (43), Expect = 7.9 Identities = 7/13 (53%), Positives = 9/13 (69%) Frame = +2 Query: 248 WMTQWLSMDVLYS 286 W W S+DVL+S Sbjct: 118 WCDVWRSLDVLFS 130 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 191,254 Number of Sequences: 438 Number of extensions: 4560 Number of successful extensions: 14 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 14 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 19977660 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -