SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0855
         (658 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81584-5|CAB04675.1|  376|Caenorhabditis elegans Hypothetical pr...   195   3e-50
X16799-1|CAA34720.1|  376|Caenorhabditis elegans actin protein.       195   3e-50
X16797-1|CAA34718.1|  376|Caenorhabditis elegans actin protein.       195   3e-50
U64601-7|AAK77622.1|  332|Caenorhabditis elegans Actin protein 4...   195   3e-50
U64601-6|AAT92068.1|  362|Caenorhabditis elegans Actin protein 4...   195   3e-50
U64601-5|AAB04575.1|  376|Caenorhabditis elegans Actin protein 4...   195   3e-50
Z81584-6|CAB04678.1|  376|Caenorhabditis elegans Hypothetical pr...   194   5e-50
Z81584-4|CAB04676.1|  376|Caenorhabditis elegans Hypothetical pr...   194   5e-50
X16796-1|CAA34717.1|  376|Caenorhabditis elegans actin protein.       194   5e-50
X16798-1|CAA34719.1|  375|Caenorhabditis elegans actin protein.       188   3e-48
Z83241-1|CAB05817.1|  375|Caenorhabditis elegans Hypothetical pr...   184   5e-47
AL132949-19|CAB70110.2|  374|Caenorhabditis elegans Hypothetical...    99   2e-21
AC006833-3|AAF60947.2|  436|Caenorhabditis elegans Hypothetical ...    94   7e-20
Z71181-1|CAA94894.1|  395|Caenorhabditis elegans Hypothetical pr...    78   5e-15
AC024200-9|AAF36012.1|  425|Caenorhabditis elegans Arp2/3 comple...    63   1e-10
U40799-8|AAA81487.1|  552|Caenorhabditis elegans Hypothetical pr...    63   2e-10
Z46676-5|CAA86667.3|  418|Caenorhabditis elegans Hypothetical pr...    44   1e-04
U24189-2|AAC47513.1|  418|Caenorhabditis elegans actin-related p...    44   1e-04
Z92826-6|CAM06583.1|  111|Caenorhabditis elegans Hypothetical pr...    32   0.31 
U40426-4|AAP40527.1|  144|Caenorhabditis elegans Diacylglycerol ...    31   0.54 
U40426-3|AAP40528.1|  351|Caenorhabditis elegans Diacylglycerol ...    31   0.54 
U40426-2|AAP40526.1|  536|Caenorhabditis elegans Diacylglycerol ...    31   0.54 
U53344-4|AAA96225.2|  575|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U42436-1|AAF99891.1|  305|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AC024775-3|AAK68454.1|  580|Caenorhabditis elegans Hypothetical ...    28   5.1  

>Z81584-5|CAB04675.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.5 protein.
          Length = 376

 Score =  195 bits (475), Expect = 3e-50
 Identities = 100/129 (77%), Positives = 106/129 (82%), Gaps = 4/129 (3%)
 Frame = -2

Query: 645 GNERFRCPEALFQPSFFGYGSLR-HPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
           GNERFRCPEALFQPSF G  S   H   +  +     ++R+     L  +TVLSGGTTMY
Sbjct: 252 GNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTTMY 307

Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
           PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367

Query: 297 PSIVHRKCF 271
           PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376


>X16799-1|CAA34720.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  195 bits (475), Expect = 3e-50
 Identities = 100/129 (77%), Positives = 106/129 (82%), Gaps = 4/129 (3%)
 Frame = -2

Query: 645 GNERFRCPEALFQPSFFGYGSLR-HPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
           GNERFRCPEALFQPSF G  S   H   +  +     ++R+     L  +TVLSGGTTMY
Sbjct: 252 GNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTTMY 307

Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
           PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367

Query: 297 PSIVHRKCF 271
           PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376


>X16797-1|CAA34718.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  195 bits (475), Expect = 3e-50
 Identities = 100/129 (77%), Positives = 106/129 (82%), Gaps = 4/129 (3%)
 Frame = -2

Query: 645 GNERFRCPEALFQPSFFGYGSLR-HPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
           GNERFRCPEALFQPSF G  S   H   +  +     ++R+     L  +TVLSGGTTMY
Sbjct: 252 GNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTTMY 307

Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
           PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367

Query: 297 PSIVHRKCF 271
           PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376


>U64601-7|AAK77622.1|  332|Caenorhabditis elegans Actin protein 4,
           isoform b protein.
          Length = 332

 Score =  195 bits (475), Expect = 3e-50
 Identities = 100/129 (77%), Positives = 106/129 (82%), Gaps = 4/129 (3%)
 Frame = -2

Query: 645 GNERFRCPEALFQPSFFGYGSLR-HPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
           GNERFRCPEALFQPSF G  S   H   +  +     ++R+     L  +TVLSGGTTMY
Sbjct: 208 GNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTTMY 263

Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
           PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 264 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 323

Query: 297 PSIVHRKCF 271
           PSIVHRKCF
Sbjct: 324 PSIVHRKCF 332


>U64601-6|AAT92068.1|  362|Caenorhabditis elegans Actin protein 4,
           isoform c protein.
          Length = 362

 Score =  195 bits (475), Expect = 3e-50
 Identities = 100/129 (77%), Positives = 106/129 (82%), Gaps = 4/129 (3%)
 Frame = -2

Query: 645 GNERFRCPEALFQPSFFGYGSLR-HPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
           GNERFRCPEALFQPSF G  S   H   +  +     ++R+     L  +TVLSGGTTMY
Sbjct: 238 GNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTTMY 293

Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
           PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 294 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 353

Query: 297 PSIVHRKCF 271
           PSIVHRKCF
Sbjct: 354 PSIVHRKCF 362


>U64601-5|AAB04575.1|  376|Caenorhabditis elegans Actin protein 4,
           isoform a protein.
          Length = 376

 Score =  195 bits (475), Expect = 3e-50
 Identities = 100/129 (77%), Positives = 106/129 (82%), Gaps = 4/129 (3%)
 Frame = -2

Query: 645 GNERFRCPEALFQPSFFGYGSLR-HPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
           GNERFRCPEALFQPSF G  S   H   +  +     ++R+     L  +TVLSGGTTMY
Sbjct: 252 GNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTTMY 307

Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
           PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367

Query: 297 PSIVHRKCF 271
           PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376


>Z81584-6|CAB04678.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.6 protein.
          Length = 376

 Score =  194 bits (473), Expect = 5e-50
 Identities = 99/129 (76%), Positives = 106/129 (82%), Gaps = 4/129 (3%)
 Frame = -2

Query: 645 GNERFRCPEALFQPSFFGYGSLR-HPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
           GNERFRCPEA+FQPSF G  S   H   +  +     ++R+     L  +TVLSGGTTMY
Sbjct: 252 GNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTTMY 307

Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
           PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367

Query: 297 PSIVHRKCF 271
           PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376


>Z81584-4|CAB04676.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.4 protein.
          Length = 376

 Score =  194 bits (473), Expect = 5e-50
 Identities = 99/129 (76%), Positives = 106/129 (82%), Gaps = 4/129 (3%)
 Frame = -2

Query: 645 GNERFRCPEALFQPSFFGYGSLR-HPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
           GNERFRCPEA+FQPSF G  S   H   +  +     ++R+     L  +TVLSGGTTMY
Sbjct: 252 GNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTTMY 307

Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
           PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367

Query: 297 PSIVHRKCF 271
           PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376


>X16796-1|CAA34717.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  194 bits (473), Expect = 5e-50
 Identities = 99/129 (76%), Positives = 106/129 (82%), Gaps = 4/129 (3%)
 Frame = -2

Query: 645 GNERFRCPEALFQPSFFGYGSLR-HPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
           GNERFRCPEA+FQPSF G  S   H   +  +     ++R+     L  +TVLSGGTTMY
Sbjct: 252 GNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTTMY 307

Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
           PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367

Query: 297 PSIVHRKCF 271
           PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376


>X16798-1|CAA34719.1|  375|Caenorhabditis elegans actin protein.
          Length = 375

 Score =  188 bits (458), Expect = 3e-48
 Identities = 98/129 (75%), Positives = 105/129 (81%), Gaps = 4/129 (3%)
 Frame = -2

Query: 645 GNERFRCPEALFQPSFFGYGSLR-HPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
           GNERFRCPEA+FQPSF G  S   H   +  +     ++R+     L  +TVLSGGTTMY
Sbjct: 252 GNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTTMY 307

Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
           PGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366

Query: 297 PSIVHRKCF 271
           PSIVHRKCF
Sbjct: 367 PSIVHRKCF 375


>Z83241-1|CAB05817.1|  375|Caenorhabditis elegans Hypothetical
           protein T25C8.2 protein.
          Length = 375

 Score =  184 bits (448), Expect = 5e-47
 Identities = 94/129 (72%), Positives = 104/129 (80%), Gaps = 4/129 (3%)
 Frame = -2

Query: 645 GNERFRCPEALFQPSFFGY-GSLRHPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
           GNERFRCPE LFQP+F G  G+  H   +  +     ++R+     L  +TVLSGGT+M+
Sbjct: 251 GNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKD----LYANTVLSGGTSMF 306

Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
           PGIADRMQKEI  LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 307 PGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366

Query: 297 PSIVHRKCF 271
           PSIVHRKCF
Sbjct: 367 PSIVHRKCF 375


>AL132949-19|CAB70110.2|  374|Caenorhabditis elegans Hypothetical
           protein Y53F4B.22 protein.
          Length = 374

 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
 Frame = -2

Query: 642 NERFRCPEALFQPSFFG--YGSLRHPRDHI*LHHEVRRGHP*GLVRHTVLSGGTTMYPGI 469
           N  FR PE LF+P   G  +  + H  +   +  +V       L  + VLSGGTT++ G 
Sbjct: 251 NSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQT--LYSNIVLSGGTTLFKGF 308

Query: 468 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 289
            DR+  E+  +AP+  KI+I A  ER    WIGGSI+ASL TF++MW+ K+EY++ G S 
Sbjct: 309 GDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASA 368

Query: 288 VHRKCF 271
           +H++ F
Sbjct: 369 MHKRFF 374


>AC006833-3|AAF60947.2|  436|Caenorhabditis elegans Hypothetical
           protein ZK616.4 protein.
          Length = 436

 Score = 94.3 bits (224), Expect = 7e-20
 Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
 Frame = -2

Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASL 349
           L  +  ++GG ++  G  +R+   +    P T+K+++ A P   ERKY  WIGGSIL SL
Sbjct: 351 LFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSL 410

Query: 348 STFQQMWISKQEYDESGPSIVHRKC 274
            TFQQMW+SK EYDESG SIV +KC
Sbjct: 411 GTFQQMWVSKAEYDESGKSIVEKKC 435


>Z71181-1|CAA94894.1|  395|Caenorhabditis elegans Hypothetical
           protein K07C5.1 protein.
          Length = 395

 Score = 78.2 bits (184), Expect = 5e-15
 Identities = 49/129 (37%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
 Frame = -2

Query: 645 GNERFRCPEALFQPSFFGYGSLRHPRDHI*LHHEVRRGHP*GLVRHTVLSGGTTMYPGIA 466
           G ERF  PE LFQP                              +H VLSGGTTMYPG+ 
Sbjct: 255 GGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLP 314

Query: 465 DRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL--STFQQMWI 325
            R++KE+  L           A    KI+I APP RK+ V++GG++LA+L     Q  W+
Sbjct: 315 SRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWV 374

Query: 324 SKQEYDESG 298
           SK+EY+E G
Sbjct: 375 SKKEYEEGG 383


>AC024200-9|AAF36012.1|  425|Caenorhabditis elegans Arp2/3 complex
           component protein 1 protein.
          Length = 425

 Score = 63.3 bits (147), Expect = 1e-10
 Identities = 46/136 (33%), Positives = 67/136 (49%), Gaps = 17/136 (12%)
 Frame = -2

Query: 645 GNERFRCPEALFQPSFFGYGSLRHPRDHI*-LHHEVRRGHP*GLVRHTVLSGGTTMYPGI 469
           G ERF  PE  F P F          D I  L  +       GL  + VLSGG+TM+   
Sbjct: 279 GYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDF 338

Query: 468 ADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 337
           A ++Q+++  L+                P  + +++I+   ++Y+VW GGS+LAS S F 
Sbjct: 339 ARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFY 398

Query: 336 QMWISKQEYDESGPSI 289
           Q+  +K EY E GPSI
Sbjct: 399 QVSHTKAEYMERGPSI 414


>U40799-8|AAA81487.1|  552|Caenorhabditis elegans Hypothetical
           protein F42C5.9 protein.
          Length = 552

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 36/113 (31%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
 Frame = -2

Query: 642 NERFRCPEALFQPSFFGYGSLRHPRDHI*LHHEVRR---GHP*GLVRHTVLSGGTTMYPG 472
           N RF C E LF+P  +G   L     H  +H  + +        L R+  L+GG ++ PG
Sbjct: 430 NSRFLCTEGLFKPKKWG---LDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPG 486

Query: 471 IADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 313
           IA+++++E++ + P+T+  ++   P R  + ++G  I+AS STF+   IS Q+
Sbjct: 487 IAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539


>Z46676-5|CAA86667.3|  418|Caenorhabditis elegans Hypothetical
           protein C08B11.6 protein.
          Length = 418

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
 Frame = -2

Query: 645 GNERFRCPEALFQPSFFGYGSLRHPRDHI*LHHEVRRGHP*GLVRHTVLSGGTTMYPGIA 466
           G ERF  PE LF PS             I    +        L  + ++ GG++ +PG  
Sbjct: 266 GVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFR 325

Query: 465 DRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 295
           +R+++E+ ++ P+   + +   +  P+     W  G  L  L+  +  WI+++++DE G 
Sbjct: 326 ERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGD 381

Query: 294 SIVHRKCF*T 265
           S+     F T
Sbjct: 382 SLEFSNFFQT 391


>U24189-2|AAC47513.1|  418|Caenorhabditis elegans actin-related
           protein-like protein.
          Length = 418

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
 Frame = -2

Query: 645 GNERFRCPEALFQPSFFGYGSLRHPRDHI*LHHEVRRGHP*GLVRHTVLSGGTTMYPGIA 466
           G ERF  PE LF PS             I    +        L  + ++ GG++ +PG  
Sbjct: 266 GVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFR 325

Query: 465 DRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 295
           +R+++E+ ++ P+   + +   +  P+     W  G  L  L+  +  WI+++++DE G 
Sbjct: 326 ERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGD 381

Query: 294 SIVHRKCF*T 265
           S+     F T
Sbjct: 382 SLEFSNFFQT 391


>Z92826-6|CAM06583.1|  111|Caenorhabditis elegans Hypothetical
           protein C18D11.9 protein.
          Length = 111

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = -1

Query: 538 TWTSVRTC-TPH-RIVRWYHHVPWNRRPYAKGNH 443
           TWT V    TPH R  RW ++  W  RPY  G H
Sbjct: 40  TWTKVGASQTPHIRTRRWGYYGGWGYRPYGWGYH 73


>U40426-4|AAP40527.1|  144|Caenorhabditis elegans Diacylglycerol
           kinase protein 2,isoform b protein.
          Length = 144

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 376 PYGVLPLWRSNDLNLHCRWGESCD 447
           P  VLPL   NDL+   +WG+ CD
Sbjct: 97  PVAVLPLGTGNDLSRLLKWGKKCD 120


>U40426-3|AAP40528.1|  351|Caenorhabditis elegans Diacylglycerol
           kinase protein 2,isoform c protein.
          Length = 351

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 376 PYGVLPLWRSNDLNLHCRWGESCD 447
           P  VLPL   NDL+   +WG+ CD
Sbjct: 97  PVAVLPLGTGNDLSRLLKWGKKCD 120


>U40426-2|AAP40526.1|  536|Caenorhabditis elegans Diacylglycerol
           kinase protein 2,isoform a protein.
          Length = 536

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 376 PYGVLPLWRSNDLNLHCRWGESCD 447
           P  VLPL   NDL+   +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305


>U53344-4|AAA96225.2|  575|Caenorhabditis elegans Hypothetical
           protein T07H6.5 protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -1

Query: 544 SATWTSVRTCTPHRIVRWYHHVPWNRRPYAKGNHSS 437
           ++TW+ V  C+P     W   VP  R  ++K +H S
Sbjct: 364 NSTWSHVPVCSPLSCHNWPPRVPHARILFSKSSHGS 399


>U42436-1|AAF99891.1|  305|Caenorhabditis elegans Hypothetical
           protein C49H3.8 protein.
          Length = 305

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
 Frame = -2

Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK----YSVWIGG 367
           L  + +L+GG +  PG+  R+++EI  +   +  KI +I       E K    +  W+G 
Sbjct: 209 LFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIKNTPLFVSWLGA 268

Query: 366 SILASL-STFQQMWISKQEY 310
           S+L SL  T ++  ++ +E+
Sbjct: 269 SLLGSLRETIERKSLTLEEW 288


>AC024775-3|AAK68454.1|  580|Caenorhabditis elegans Hypothetical
           protein Y41D4A.4 protein.
          Length = 580

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 13/56 (23%), Positives = 32/56 (57%)
 Frame = +2

Query: 401 GAMILIFIVDGARAVISFCIRSAIPGYMVVPPDNTVWRTSPYGCPRRTS*WSYMWS 568
           G M+L+ I+    ++++ C+ + +  Y ++  ++  WR + + C   T+ + YM+S
Sbjct: 473 GFMLLVTII---LSIVTVCV-TIVCSYFLLNAEDYRWRWTSFACGASTAFYVYMYS 524


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,729,741
Number of Sequences: 27780
Number of extensions: 344463
Number of successful extensions: 1025
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -