Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0855
(658 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 195 3e-50
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 195 3e-50
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 195 3e-50
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 195 3e-50
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 195 3e-50
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 195 3e-50
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 194 5e-50
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 194 5e-50
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 194 5e-50
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 188 3e-48
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 184 5e-47
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 99 2e-21
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 94 7e-20
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 78 5e-15
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 63 1e-10
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 44 1e-04
Z92826-6|CAM06583.1| 111|Caenorhabditis elegans Hypothetical pr... 32 0.31
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.54
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.54
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.54
U53344-4|AAA96225.2| 575|Caenorhabditis elegans Hypothetical pr... 29 2.2
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 29 2.2
AC024775-3|AAK68454.1| 580|Caenorhabditis elegans Hypothetical ... 28 5.1
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 195 bits (475), Expect = 3e-50
Identities = 100/129 (77%), Positives = 106/129 (82%), Gaps = 4/129 (3%)
Frame = -2
Query: 645 GNERFRCPEALFQPSFFGYGSLR-HPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
GNERFRCPEALFQPSF G S H + + ++R+ L +TVLSGGTTMY
Sbjct: 252 GNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTTMY 307
Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 297 PSIVHRKCF 271
PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 195 bits (475), Expect = 3e-50
Identities = 100/129 (77%), Positives = 106/129 (82%), Gaps = 4/129 (3%)
Frame = -2
Query: 645 GNERFRCPEALFQPSFFGYGSLR-HPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
GNERFRCPEALFQPSF G S H + + ++R+ L +TVLSGGTTMY
Sbjct: 252 GNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTTMY 307
Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 297 PSIVHRKCF 271
PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 195 bits (475), Expect = 3e-50
Identities = 100/129 (77%), Positives = 106/129 (82%), Gaps = 4/129 (3%)
Frame = -2
Query: 645 GNERFRCPEALFQPSFFGYGSLR-HPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
GNERFRCPEALFQPSF G S H + + ++R+ L +TVLSGGTTMY
Sbjct: 252 GNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTTMY 307
Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 297 PSIVHRKCF 271
PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 195 bits (475), Expect = 3e-50
Identities = 100/129 (77%), Positives = 106/129 (82%), Gaps = 4/129 (3%)
Frame = -2
Query: 645 GNERFRCPEALFQPSFFGYGSLR-HPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
GNERFRCPEALFQPSF G S H + + ++R+ L +TVLSGGTTMY
Sbjct: 208 GNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTTMY 263
Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 264 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 323
Query: 297 PSIVHRKCF 271
PSIVHRKCF
Sbjct: 324 PSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 195 bits (475), Expect = 3e-50
Identities = 100/129 (77%), Positives = 106/129 (82%), Gaps = 4/129 (3%)
Frame = -2
Query: 645 GNERFRCPEALFQPSFFGYGSLR-HPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
GNERFRCPEALFQPSF G S H + + ++R+ L +TVLSGGTTMY
Sbjct: 238 GNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTTMY 293
Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 294 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 353
Query: 297 PSIVHRKCF 271
PSIVHRKCF
Sbjct: 354 PSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 195 bits (475), Expect = 3e-50
Identities = 100/129 (77%), Positives = 106/129 (82%), Gaps = 4/129 (3%)
Frame = -2
Query: 645 GNERFRCPEALFQPSFFGYGSLR-HPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
GNERFRCPEALFQPSF G S H + + ++R+ L +TVLSGGTTMY
Sbjct: 252 GNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTTMY 307
Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 297 PSIVHRKCF 271
PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 194 bits (473), Expect = 5e-50
Identities = 99/129 (76%), Positives = 106/129 (82%), Gaps = 4/129 (3%)
Frame = -2
Query: 645 GNERFRCPEALFQPSFFGYGSLR-HPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
GNERFRCPEA+FQPSF G S H + + ++R+ L +TVLSGGTTMY
Sbjct: 252 GNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTTMY 307
Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 297 PSIVHRKCF 271
PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 194 bits (473), Expect = 5e-50
Identities = 99/129 (76%), Positives = 106/129 (82%), Gaps = 4/129 (3%)
Frame = -2
Query: 645 GNERFRCPEALFQPSFFGYGSLR-HPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
GNERFRCPEA+FQPSF G S H + + ++R+ L +TVLSGGTTMY
Sbjct: 252 GNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTTMY 307
Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 297 PSIVHRKCF 271
PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 194 bits (473), Expect = 5e-50
Identities = 99/129 (76%), Positives = 106/129 (82%), Gaps = 4/129 (3%)
Frame = -2
Query: 645 GNERFRCPEALFQPSFFGYGSLR-HPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
GNERFRCPEA+FQPSF G S H + + ++R+ L +TVLSGGTTMY
Sbjct: 252 GNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTTMY 307
Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 297 PSIVHRKCF 271
PSIVHRKCF
Sbjct: 368 PSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 188 bits (458), Expect = 3e-48
Identities = 98/129 (75%), Positives = 105/129 (81%), Gaps = 4/129 (3%)
Frame = -2
Query: 645 GNERFRCPEALFQPSFFGYGSLR-HPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
GNERFRCPEA+FQPSF G S H + + ++R+ L +TVLSGGTTMY
Sbjct: 252 GNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTTMY 307
Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
PGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366
Query: 297 PSIVHRKCF 271
PSIVHRKCF
Sbjct: 367 PSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 184 bits (448), Expect = 5e-47
Identities = 94/129 (72%), Positives = 104/129 (80%), Gaps = 4/129 (3%)
Frame = -2
Query: 645 GNERFRCPEALFQPSFFGY-GSLRHPRDHI*LHH---EVRRGHP*GLVRHTVLSGGTTMY 478
GNERFRCPE LFQP+F G G+ H + + ++R+ L +TVLSGGT+M+
Sbjct: 251 GNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKD----LYANTVLSGGTSMF 306
Query: 477 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 298
PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 307 PGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366
Query: 297 PSIVHRKCF 271
PSIVHRKCF
Sbjct: 367 PSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 99.1 bits (236), Expect = 2e-21
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = -2
Query: 642 NERFRCPEALFQPSFFG--YGSLRHPRDHI*LHHEVRRGHP*GLVRHTVLSGGTTMYPGI 469
N FR PE LF+P G + + H + + +V L + VLSGGTT++ G
Sbjct: 251 NSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQT--LYSNIVLSGGTTLFKGF 308
Query: 468 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 289
DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G S
Sbjct: 309 GDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASA 368
Query: 288 VHRKCF 271
+H++ F
Sbjct: 369 MHKRFF 374
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 94.3 bits (224), Expect = 7e-20
Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Frame = -2
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASL 349
L + ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL
Sbjct: 351 LFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSL 410
Query: 348 STFQQMWISKQEYDESGPSIVHRKC 274
TFQQMW+SK EYDESG SIV +KC
Sbjct: 411 GTFQQMWVSKAEYDESGKSIVEKKC 435
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 78.2 bits (184), Expect = 5e-15
Identities = 49/129 (37%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Frame = -2
Query: 645 GNERFRCPEALFQPSFFGYGSLRHPRDHI*LHHEVRRGHP*GLVRHTVLSGGTTMYPGIA 466
G ERF PE LFQP +H VLSGGTTMYPG+
Sbjct: 255 GGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLP 314
Query: 465 DRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL--STFQQMWI 325
R++KE+ L A KI+I APP RK+ V++GG++LA+L Q W+
Sbjct: 315 SRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWV 374
Query: 324 SKQEYDESG 298
SK+EY+E G
Sbjct: 375 SKKEYEEGG 383
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 63.3 bits (147), Expect = 1e-10
Identities = 46/136 (33%), Positives = 67/136 (49%), Gaps = 17/136 (12%)
Frame = -2
Query: 645 GNERFRCPEALFQPSFFGYGSLRHPRDHI*-LHHEVRRGHP*GLVRHTVLSGGTTMYPGI 469
G ERF PE F P F D I L + GL + VLSGG+TM+
Sbjct: 279 GYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDF 338
Query: 468 ADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 337
A ++Q+++ L+ P + +++I+ ++Y+VW GGS+LAS S F
Sbjct: 339 ARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFY 398
Query: 336 QMWISKQEYDESGPSI 289
Q+ +K EY E GPSI
Sbjct: 399 QVSHTKAEYMERGPSI 414
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 62.9 bits (146), Expect = 2e-10
Identities = 36/113 (31%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Frame = -2
Query: 642 NERFRCPEALFQPSFFGYGSLRHPRDHI*LHHEVRR---GHP*GLVRHTVLSGGTTMYPG 472
N RF C E LF+P +G L H +H + + L R+ L+GG ++ PG
Sbjct: 430 NSRFLCTEGLFKPKKWG---LDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPG 486
Query: 471 IADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 313
IA+++++E++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 487 IAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Frame = -2
Query: 645 GNERFRCPEALFQPSFFGYGSLRHPRDHI*LHHEVRRGHP*GLVRHTVLSGGTTMYPGIA 466
G ERF PE LF PS I + L + ++ GG++ +PG
Sbjct: 266 GVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFR 325
Query: 465 DRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 295
+R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE G
Sbjct: 326 ERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGD 381
Query: 294 SIVHRKCF*T 265
S+ F T
Sbjct: 382 SLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Frame = -2
Query: 645 GNERFRCPEALFQPSFFGYGSLRHPRDHI*LHHEVRRGHP*GLVRHTVLSGGTTMYPGIA 466
G ERF PE LF PS I + L + ++ GG++ +PG
Sbjct: 266 GVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFR 325
Query: 465 DRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 295
+R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE G
Sbjct: 326 ERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGD 381
Query: 294 SIVHRKCF*T 265
S+ F T
Sbjct: 382 SLEFSNFFQT 391
>Z92826-6|CAM06583.1| 111|Caenorhabditis elegans Hypothetical
protein C18D11.9 protein.
Length = 111
Score = 32.3 bits (70), Expect = 0.31
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -1
Query: 538 TWTSVRTC-TPH-RIVRWYHHVPWNRRPYAKGNH 443
TWT V TPH R RW ++ W RPY G H
Sbjct: 40 TWTKVGASQTPHIRTRRWGYYGGWGYRPYGWGYH 73
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 376 PYGVLPLWRSNDLNLHCRWGESCD 447
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 376 PYGVLPLWRSNDLNLHCRWGESCD 447
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 376 PYGVLPLWRSNDLNLHCRWGESCD 447
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>U53344-4|AAA96225.2| 575|Caenorhabditis elegans Hypothetical
protein T07H6.5 protein.
Length = 575
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1
Query: 544 SATWTSVRTCTPHRIVRWYHHVPWNRRPYAKGNHSS 437
++TW+ V C+P W VP R ++K +H S
Sbjct: 364 NSTWSHVPVCSPLSCHNWPPRVPHARILFSKSSHGS 399
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Frame = -2
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK----YSVWIGG 367
L + +L+GG + PG+ R+++EI + + KI +I E K + W+G
Sbjct: 209 LFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIKNTPLFVSWLGA 268
Query: 366 SILASL-STFQQMWISKQEY 310
S+L SL T ++ ++ +E+
Sbjct: 269 SLLGSLRETIERKSLTLEEW 288
>AC024775-3|AAK68454.1| 580|Caenorhabditis elegans Hypothetical
protein Y41D4A.4 protein.
Length = 580
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/56 (23%), Positives = 32/56 (57%)
Frame = +2
Query: 401 GAMILIFIVDGARAVISFCIRSAIPGYMVVPPDNTVWRTSPYGCPRRTS*WSYMWS 568
G M+L+ I+ ++++ C+ + + Y ++ ++ WR + + C T+ + YM+S
Sbjct: 473 GFMLLVTII---LSIVTVCV-TIVCSYFLLNAEDYRWRWTSFACGASTAFYVYMYS 524
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,729,741
Number of Sequences: 27780
Number of extensions: 344463
Number of successful extensions: 1025
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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