Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0854
(749 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 150 8e-37
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 150 8e-37
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 149 2e-36
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 149 2e-36
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 146 1e-35
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 146 1e-35
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 141 4e-34
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 86 3e-17
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 84 1e-16
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 84 1e-16
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 84 1e-16
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 83 2e-16
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 83 2e-16
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 82 3e-16
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 82 4e-16
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 82 4e-16
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 55 4e-08
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 55 4e-08
At4g33990.1 68417.m04823 pentatricopeptide (PPR) repeat-containi... 30 1.9
At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identica... 30 1.9
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 2.5
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 3.3
At4g30150.1 68417.m04287 expressed protein 29 4.4
At2g31690.1 68415.m03868 lipase class 3 family protein similar t... 28 5.8
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 28 5.8
At1g52160.1 68414.m05887 metallo-beta-lactamase family protein 28 5.8
At1g07160.1 68414.m00762 protein phosphatase 2C, putative / PP2C... 28 5.8
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 150 bits (364), Expect = 8e-37
Identities = 61/68 (89%), Positives = 68/68 (100%)
Frame = +3
Query: 51 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 230
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 231 HVPRAVFV 254
HVPRAVFV
Sbjct: 61 HVPRAVFV 68
Score = 141 bits (341), Expect = 5e-34
Identities = 61/82 (74%), Positives = 75/82 (91%)
Frame = +1
Query: 502 LIVERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 681
L++ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYD
Sbjct: 152 LLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYD 211
Query: 682 ICRRNLDIERPTYTNLNRLIGQ 747
ICRR+L IERPTYTNLNRL+ Q
Sbjct: 212 ICRRSLSIERPTYTNLNRLVSQ 233
Score = 140 bits (340), Expect = 7e-34
Identities = 63/70 (90%), Positives = 68/70 (97%)
Frame = +2
Query: 257 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 436
LEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 437 TGLQGFLIFH 466
TGLQGFL+F+
Sbjct: 130 TGLQGFLVFN 139
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 150 bits (364), Expect = 8e-37
Identities = 61/68 (89%), Positives = 68/68 (100%)
Frame = +3
Query: 51 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 230
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 231 HVPRAVFV 254
HVPRAVFV
Sbjct: 61 HVPRAVFV 68
Score = 141 bits (341), Expect = 5e-34
Identities = 61/82 (74%), Positives = 75/82 (91%)
Frame = +1
Query: 502 LIVERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 681
L++ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYD
Sbjct: 152 LLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYD 211
Query: 682 ICRRNLDIERPTYTNLNRLIGQ 747
ICRR+L IERPTYTNLNRL+ Q
Sbjct: 212 ICRRSLSIERPTYTNLNRLVSQ 233
Score = 140 bits (340), Expect = 7e-34
Identities = 63/70 (90%), Positives = 68/70 (97%)
Frame = +2
Query: 257 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 436
LEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 437 TGLQGFLIFH 466
TGLQGFL+F+
Sbjct: 130 TGLQGFLVFN 139
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 149 bits (361), Expect = 2e-36
Identities = 61/68 (89%), Positives = 67/68 (98%)
Frame = +3
Query: 51 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 230
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 231 HVPRAVFV 254
HVPRAVFV
Sbjct: 61 HVPRAVFV 68
Score = 141 bits (342), Expect = 4e-34
Identities = 61/82 (74%), Positives = 76/82 (92%)
Frame = +1
Query: 502 LIVERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 681
L++ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYD
Sbjct: 152 LLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYD 211
Query: 682 ICRRNLDIERPTYTNLNRLIGQ 747
ICRR+L+IERPTYTNLNRL+ Q
Sbjct: 212 ICRRSLNIERPTYTNLNRLVSQ 233
Score = 140 bits (340), Expect = 7e-34
Identities = 63/70 (90%), Positives = 68/70 (97%)
Frame = +2
Query: 257 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 436
LEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 437 TGLQGFLIFH 466
TGLQGFL+F+
Sbjct: 130 TGLQGFLVFN 139
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 149 bits (361), Expect = 2e-36
Identities = 61/68 (89%), Positives = 67/68 (98%)
Frame = +3
Query: 51 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 230
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 231 HVPRAVFV 254
HVPRAVFV
Sbjct: 61 HVPRAVFV 68
Score = 141 bits (342), Expect = 4e-34
Identities = 61/82 (74%), Positives = 76/82 (92%)
Frame = +1
Query: 502 LIVERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 681
L++ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYD
Sbjct: 152 LLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYD 211
Query: 682 ICRRNLDIERPTYTNLNRLIGQ 747
ICRR+L+IERPTYTNLNRL+ Q
Sbjct: 212 ICRRSLNIERPTYTNLNRLVSQ 233
Score = 140 bits (340), Expect = 7e-34
Identities = 63/70 (90%), Positives = 68/70 (97%)
Frame = +2
Query: 257 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 436
LEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 437 TGLQGFLIFH 466
TGLQGFL+F+
Sbjct: 130 TGLQGFLVFN 139
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 146 bits (354), Expect = 1e-35
Identities = 66/82 (80%), Positives = 76/82 (92%)
Frame = +1
Query: 502 LIVERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 681
L++ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYD
Sbjct: 152 LLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYD 211
Query: 682 ICRRNLDIERPTYTNLNRLIGQ 747
ICRR+LDIERPTYTNLNRLI Q
Sbjct: 212 ICRRSLDIERPTYTNLNRLISQ 233
Score = 140 bits (338), Expect = 1e-33
Identities = 61/70 (87%), Positives = 68/70 (97%)
Frame = +2
Query: 257 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 436
LEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNC 129
Query: 437 TGLQGFLIFH 466
TGLQGFL+F+
Sbjct: 130 TGLQGFLVFN 139
Score = 132 bits (318), Expect = 3e-31
Identities = 54/68 (79%), Positives = 62/68 (91%)
Frame = +3
Query: 51 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 230
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 231 HVPRAVFV 254
HVPRAVFV
Sbjct: 61 HVPRAVFV 68
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 146 bits (354), Expect = 1e-35
Identities = 66/82 (80%), Positives = 76/82 (92%)
Frame = +1
Query: 502 LIVERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 681
L++ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYD
Sbjct: 152 LLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYD 211
Query: 682 ICRRNLDIERPTYTNLNRLIGQ 747
ICRR+LDIERPTYTNLNRLI Q
Sbjct: 212 ICRRSLDIERPTYTNLNRLISQ 233
Score = 140 bits (338), Expect = 1e-33
Identities = 61/70 (87%), Positives = 68/70 (97%)
Frame = +2
Query: 257 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 436
LEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNC 129
Query: 437 TGLQGFLIFH 466
TGLQGFL+F+
Sbjct: 130 TGLQGFLVFN 139
Score = 132 bits (318), Expect = 3e-31
Identities = 54/68 (79%), Positives = 62/68 (91%)
Frame = +3
Query: 51 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 230
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 231 HVPRAVFV 254
HVPRAVFV
Sbjct: 61 HVPRAVFV 68
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 141 bits (342), Expect = 4e-34
Identities = 63/82 (76%), Positives = 75/82 (91%)
Frame = +1
Query: 502 LIVERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 681
L++ERLSVD+GKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D ++DNEAIYD
Sbjct: 152 LLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYD 211
Query: 682 ICRRNLDIERPTYTNLNRLIGQ 747
ICRR+LDIERPTY+NLNRLI Q
Sbjct: 212 ICRRSLDIERPTYSNLNRLISQ 233
Score = 136 bits (328), Expect = 2e-32
Identities = 62/91 (68%), Positives = 71/91 (78%)
Frame = +2
Query: 194 FQHFLQRDRSWQARTPCCLRHLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 373
F F S Q LEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 374 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFH 466
T+G+EIVD L+R+RKLAD CTGLQGFL+F+
Sbjct: 109 TVGREIVDTCLERLRKLADNCTGLQGFLVFN 139
Score = 125 bits (302), Expect = 3e-29
Identities = 50/68 (73%), Positives = 61/68 (89%)
Frame = +3
Query: 51 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 230
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 231 HVPRAVFV 254
HVPRAVF+
Sbjct: 61 HVPRAVFL 68
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 85.8 bits (203), Expect = 3e-17
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = +2
Query: 248 LRHLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 427
L LEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A
Sbjct: 65 LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 124
Query: 428 DQCTGLQGFLIFH 466
+ C LQGF + H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 81.8 bits (193), Expect = 4e-16
Identities = 33/80 (41%), Positives = 56/80 (70%)
Frame = +1
Query: 502 LIVERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 681
L++ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YD
Sbjct: 150 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 682 ICRRNLDIERPTYTNLNRLI 741
IC R L + P++ +LN LI
Sbjct: 210 ICFRTLKLTTPSFGDLNHLI 229
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +3
Query: 51 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 221
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 222 AGKHVPRAVFV 254
G++VPRA+ +
Sbjct: 56 CGRYVPRAILM 66
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 83.8 bits (198), Expect = 1e-16
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = +2
Query: 248 LRHLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 427
L LEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A
Sbjct: 65 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 428 DQCTGLQGFLIFH 466
+ C LQGF + H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 81.8 bits (193), Expect = 4e-16
Identities = 33/80 (41%), Positives = 56/80 (70%)
Frame = +1
Query: 502 LIVERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 681
L++ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YD
Sbjct: 150 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 682 ICRRNLDIERPTYTNLNRLI 741
IC R L + P++ +LN LI
Sbjct: 210 ICFRTLKLTTPSFGDLNHLI 229
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/68 (36%), Positives = 37/68 (54%)
Frame = +3
Query: 51 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 230
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 231 HVPRAVFV 254
VPRAV +
Sbjct: 59 FVPRAVLM 66
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 83.8 bits (198), Expect = 1e-16
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = +2
Query: 248 LRHLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 427
L LEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A
Sbjct: 65 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 428 DQCTGLQGFLIFH 466
+ C LQGF + H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 81.4 bits (192), Expect = 6e-16
Identities = 32/80 (40%), Positives = 56/80 (70%)
Frame = +1
Query: 502 LIVERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 681
L++ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YD
Sbjct: 150 LLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 682 ICRRNLDIERPTYTNLNRLI 741
IC R L + P++ +LN LI
Sbjct: 210 ICFRTLKLSTPSFGDLNHLI 229
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/68 (38%), Positives = 39/68 (57%)
Frame = +3
Query: 51 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 230
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 231 HVPRAVFV 254
+VPRAV +
Sbjct: 59 YVPRAVLM 66
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 83.8 bits (198), Expect = 1e-16
Identities = 35/73 (47%), Positives = 49/73 (67%)
Frame = +2
Query: 248 LRHLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 427
L LEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A
Sbjct: 66 LMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 125
Query: 428 DQCTGLQGFLIFH 466
+ C LQGF + H
Sbjct: 126 ENCDCLQGFQVCH 138
Score = 82.2 bits (194), Expect = 3e-16
Identities = 33/80 (41%), Positives = 56/80 (70%)
Frame = +1
Query: 502 LIVERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 681
L++ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YD
Sbjct: 151 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 210
Query: 682 ICRRNLDIERPTYTNLNRLI 741
IC R L + P++ +LN LI
Sbjct: 211 ICFRTLKLSTPSFGDLNHLI 230
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/68 (39%), Positives = 40/68 (58%)
Frame = +3
Query: 51 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 230
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGR 59
Query: 231 HVPRAVFV 254
+VPRAV +
Sbjct: 60 YVPRAVLM 67
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 83.0 bits (196), Expect = 2e-16
Identities = 33/80 (41%), Positives = 56/80 (70%)
Frame = +1
Query: 502 LIVERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 681
L++ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YD
Sbjct: 150 LLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 682 ICRRNLDIERPTYTNLNRLI 741
IC R L + PT+ +LN LI
Sbjct: 210 ICFRTLKLANPTFGDLNHLI 229
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/73 (45%), Positives = 48/73 (65%)
Frame = +2
Query: 248 LRHLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 427
L LEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A
Sbjct: 65 LMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 428 DQCTGLQGFLIFH 466
+ LQGF + H
Sbjct: 125 ENSDCLQGFQVCH 137
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/68 (41%), Positives = 38/68 (55%)
Frame = +3
Query: 51 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 230
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 231 HVPRAVFV 254
+VPRAV +
Sbjct: 59 YVPRAVLM 66
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 83.0 bits (196), Expect = 2e-16
Identities = 33/80 (41%), Positives = 56/80 (70%)
Frame = +1
Query: 502 LIVERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 681
L++ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YD
Sbjct: 150 LLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 682 ICRRNLDIERPTYTNLNRLI 741
IC R L + PT+ +LN LI
Sbjct: 210 ICFRTLKLANPTFGDLNHLI 229
Score = 81.0 bits (191), Expect = 8e-16
Identities = 34/73 (46%), Positives = 49/73 (67%)
Frame = +2
Query: 248 LRHLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 427
L LEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A
Sbjct: 65 LMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 428 DQCTGLQGFLIFH 466
+ C LQGF + H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 57.6 bits (133), Expect = 8e-09
Identities = 29/68 (42%), Positives = 38/68 (55%)
Frame = +3
Query: 51 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 230
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 231 HVPRAVFV 254
+VPRAV +
Sbjct: 59 YVPRAVLM 66
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 82.2 bits (194), Expect = 3e-16
Identities = 34/73 (46%), Positives = 49/73 (67%)
Frame = +2
Query: 248 LRHLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 427
L LEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A
Sbjct: 66 LMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 125
Query: 428 DQCTGLQGFLIFH 466
+ C LQGF + H
Sbjct: 126 ENCDCLQGFQVCH 138
Score = 82.2 bits (194), Expect = 3e-16
Identities = 33/80 (41%), Positives = 56/80 (70%)
Frame = +1
Query: 502 LIVERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 681
L++ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YD
Sbjct: 151 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 210
Query: 682 ICRRNLDIERPTYTNLNRLI 741
IC R L + P++ +LN LI
Sbjct: 211 ICFRTLKLSTPSFGDLNHLI 230
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = +3
Query: 51 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 230
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 231 HVPRAVFV 254
+VPRAV +
Sbjct: 60 YVPRAVLM 67
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 81.8 bits (193), Expect = 4e-16
Identities = 33/80 (41%), Positives = 56/80 (70%)
Frame = +1
Query: 502 LIVERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 681
L++ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YD
Sbjct: 150 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 682 ICRRNLDIERPTYTNLNRLI 741
IC R L + P++ +LN LI
Sbjct: 210 ICFRTLKLTTPSFGDLNHLI 229
Score = 81.4 bits (192), Expect = 6e-16
Identities = 35/73 (47%), Positives = 48/73 (65%)
Frame = +2
Query: 248 LRHLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 427
L LEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK A
Sbjct: 65 LMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 428 DQCTGLQGFLIFH 466
+ C LQGF + H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 58.0 bits (134), Expect = 6e-09
Identities = 27/68 (39%), Positives = 38/68 (55%)
Frame = +3
Query: 51 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 230
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 231 HVPRAVFV 254
VPRAV +
Sbjct: 59 FVPRAVLM 66
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 81.8 bits (193), Expect = 4e-16
Identities = 33/80 (41%), Positives = 56/80 (70%)
Frame = +1
Query: 502 LIVERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 681
L++ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YD
Sbjct: 150 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 682 ICRRNLDIERPTYTNLNRLI 741
IC R L + P++ +LN LI
Sbjct: 210 ICFRTLKLTTPSFGDLNHLI 229
Score = 81.4 bits (192), Expect = 6e-16
Identities = 35/73 (47%), Positives = 48/73 (65%)
Frame = +2
Query: 248 LRHLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 427
L LEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK A
Sbjct: 65 LMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 428 DQCTGLQGFLIFH 466
+ C LQGF + H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 58.0 bits (134), Expect = 6e-09
Identities = 27/68 (39%), Positives = 38/68 (55%)
Frame = +3
Query: 51 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 230
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 231 HVPRAVFV 254
VPRAV +
Sbjct: 59 FVPRAVLM 66
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/67 (41%), Positives = 38/67 (56%)
Frame = +3
Query: 54 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 233
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 234 VPRAVFV 254
+PRA+ +
Sbjct: 61 IPRALLI 67
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +1
Query: 505 IVERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 681
++E L+ Y KK ++++P + S VV+PYNS+LT ++DC ++DN A+
Sbjct: 153 LLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 212
Query: 682 ICRRNLDIERPTYTNLNRLI 741
I L + PT+ N L+
Sbjct: 213 IAVERLHLTNPTFAQTNSLV 232
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 257 LEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLAD 430
LEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D I + AD
Sbjct: 69 LEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIMDMIDREAD 127
Query: 431 QCTGLQGFLIFH 466
L+GF++ H
Sbjct: 128 GSDSLEGFVLCH 139
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/67 (41%), Positives = 38/67 (56%)
Frame = +3
Query: 54 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 233
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 234 VPRAVFV 254
+PRA+ +
Sbjct: 61 IPRALLI 67
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +1
Query: 505 IVERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 681
++E L+ Y KK ++++P + S VV+PYNS+LT ++DC ++DN A+
Sbjct: 153 LLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGR 212
Query: 682 ICRRNLDIERPTYTNLNRLI 741
I L + PT+ N L+
Sbjct: 213 IAVERLHLTNPTFAQTNSLV 232
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 257 LEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLAD 430
LEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D I + AD
Sbjct: 69 LEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIMDMIDREAD 127
Query: 431 QCTGLQGFLIFH 466
L+GF++ H
Sbjct: 128 GSDSLEGFVLCH 139
>At4g33990.1 68417.m04823 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 823
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +1
Query: 487 LWVHFLIVERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 666
L++ +V L+ YGK +LE A+ Q+ P+N+++ H H + A M+
Sbjct: 482 LYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFK 541
Query: 667 EAI 675
E +
Sbjct: 542 EML 544
>At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identical
to endo-polygalacturonase [Arabidopsis thaliana]
GI:2597824
Length = 431
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -3
Query: 705 NVEITA---ADVIDGFIVDHESTVRVLKGCVGGEDRVVGLDDGSGNLR 571
NVEITA + DG + + +RV +G D + ++DG+ NL+
Sbjct: 230 NVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQ 277
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 487 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYD 389
+G TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 220 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 95
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At4g30150.1 68417.m04287 expressed protein
Length = 2009
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +1
Query: 496 HFLIVERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFM 657
H ++VE + G + L+F S V+EP++ L TH T ++ C F+
Sbjct: 275 HTVLVENIKDSLGDRHVLKF--------SCLVLEPFSRFLMTHPTTKNGFCDFL 320
>At2g31690.1 68415.m03868 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 484
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 274 NNSRFKMTKTARGTCLPAPVSLKKVLKESSPPPM 173
N R K ++ + L APV L + SSPPP+
Sbjct: 38 NPKRLKTANSSSSSSLLAPVILNSPVASSSPPPI 71
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 1287
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 523 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD------CAFMVDNEAIYDI 684
+D+ + F P VS A V+PYNS +H D C+F DN+ ++
Sbjct: 285 IDFSSARGISFKFESNPSVSPACVKPYNS-FDSHLADSDLDRPNNYSCSFQ-DNKTVHVK 342
Query: 685 CRRNLDIERPTYTNL 729
+ + E+ Y+++
Sbjct: 343 VKPEAESEKVVYSSV 357
>At1g52160.1 68414.m05887 metallo-beta-lactamase family protein
Length = 890
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -1
Query: 251 EDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITD---LDSG- 84
E G+ + SG + E + ++ D + H A DA+++ T +D G
Sbjct: 750 EQILGWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDVGS 809
Query: 83 LANVYRDALTHF 48
ANVYR LTHF
Sbjct: 810 AANVYRIVLTHF 821
>At1g07160.1 68414.m00762 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase 2C GI:2582800
from [Medicago sativa]
Length = 380
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 127 WSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVLSSSS*TYC 270
+S +SSL P ET+ +LS P ++ST P +S + +C
Sbjct: 13 FSPSSSLFCNKPLNTSPAHETLTLSLSHLNPPVSSTSPSAASPTSPFC 60
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,137,306
Number of Sequences: 28952
Number of extensions: 382793
Number of successful extensions: 1233
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -