Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0850
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.5  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.2  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   9.6  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   9.6  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 19  IPFSNIFYIILILFTSNFCY 78
           + F + F+I+ +L+  N CY
Sbjct: 272 LTFWSAFFIVNVLYICNQCY 291


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 196 VYTCSCADSKN 228
           V+TC C D KN
Sbjct: 174 VFTCRCKDYKN 184


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 381 LIFRQVYINNTIRKNVF 431
           ++FR+  ++N  RKN F
Sbjct: 74  MLFREPQLHNLCRKNCF 90


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 381 LIFRQVYINNTIRKNVF 431
           ++FR+  ++N  RKN F
Sbjct: 74  MLFREPQLHNLCRKNCF 90


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,225
Number of Sequences: 336
Number of extensions: 3105
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)