Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0850
         (694 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    23   3.6  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    22   4.8  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    22   4.8  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    22   4.8  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    22   4.8  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   8.4  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   8.4  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   8.4  

>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 405 NNTIRKNVFFYWGGNNKYKY 464
           N TI  N  + +  NNKY Y
Sbjct: 87  NKTIHNNNNYKYNYNNKYNY 106


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = +3

Query: 405 NNTIRKNVFFYWGGNNKY--KYFFSI 476
           NNTI  N + Y   NN Y  K +++I
Sbjct: 87  NNTIHNNNYKYNYNNNNYNKKLYYNI 112


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = +3

Query: 405 NNTIRKNVFFYWGGNNKY--KYFFSI 476
           NNTI  N + Y   NN Y  K +++I
Sbjct: 87  NNTIHNNNYKYNYNNNNYNKKLYYNI 112


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = +3

Query: 405 NNTIRKNVFFYWGGNNKY--KYFFSI 476
           NNTI  N + Y   NN Y  K +++I
Sbjct: 87  NNTIHNNNYKYNYNNNNYNKKLYYNI 112


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = +3

Query: 405 NNTIRKNVFFYWGGNNKY--KYFFSI 476
           NNTI  N + Y   NN Y  K +++I
Sbjct: 87  NNTIHNNNYKYNYNNNNYNKKLYYNI 112


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 405 NNTIRKNVFFYWGGNNKY 458
           NNTI  N + Y   NN Y
Sbjct: 86  NNTIHNNNYKYNYNNNNY 103


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 405 NNTIRKNVFFYWGGNNKY 458
           NNTI  N + Y   NN Y
Sbjct: 86  NNTIHNNNYKYNYNNNNY 103


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 340 HKPVFLTQKINL 375
           HKPVFL  ++NL
Sbjct: 377 HKPVFLEFRMNL 388


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,261
Number of Sequences: 438
Number of extensions: 3468
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)