Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0844
         (609 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   2.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   2.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.1  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   8.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   8.1  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 33  PRLALPCVPVSCVIP 77
           P  AL C P  CV+P
Sbjct: 149 PNRALDCDPTQCVLP 163


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 547 ARFALSNSLERHPSMSTV*KLSCGTCR 467
           AR    N  E HPS+ ++ +  C TC+
Sbjct: 851 ARKPYVNGSEYHPSIVSLGEYKCVTCK 877


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 33  PRLALPCVPVSCVIP 77
           P  A PC P  CV+P
Sbjct: 157 PNRAPPCDPAVCVLP 171


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -3

Query: 256 TSPGFWWYH 230
           T+PG+W +H
Sbjct: 595 TNPGYWLFH 603


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 553 CIARFALSNSLERH 512
           C+ RF+ S +L RH
Sbjct: 111 CLLRFSQSGNLNRH 124


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 553 CIARFALSNSLERH 512
           C+ RF+ S +L RH
Sbjct: 367 CLLRFSQSGNLNRH 380


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,199
Number of Sequences: 336
Number of extensions: 1986
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)