Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0844
         (609 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   3.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   3.1  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   4.1  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   7.1  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.4  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 141 EK*FDCVLNERRNG 182
           E+ FDC+L + RNG
Sbjct: 286 EEVFDCLLKKERNG 299


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 141 EK*FDCVLNERRNG 182
           E+ FDC+L + RNG
Sbjct: 376 EEVFDCLLKKERNG 389


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +2

Query: 170 ETKWPRRWLTNQRWTMKFTI 229
           E KW R+     RW++  T+
Sbjct: 154 ECKWSRKGFLRTRWSISGTV 173


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 299 GALLIPGLVHVVRGH 255
           G LL  GL HV+RG+
Sbjct: 614 GILLKSGLYHVLRGN 628


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -3

Query: 586 GFPAPHPFF*RCIARFAL 533
           G P P     RCIAR AL
Sbjct: 474 GLPEPCRCHARCIARLAL 491


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -3

Query: 586 GFPAPHPFF*RCIARFAL 533
           G P P     RCIAR AL
Sbjct: 474 GLPEPCRCHARCIARLAL 491


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,740
Number of Sequences: 438
Number of extensions: 2306
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)